White Rose University Consortium logo
University of Leeds logo University of Sheffield logo York University logo

Browse by Academic Unit (A-Z)

Up a level
Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0 [feed] RSS 2.0 Altmetric
Group by: Creators Name | Item Type
Jump to: A | B | C | D | E | F | G | H | J | K | L | M | N | P | R | S | T | W | Y
Number of items at this level: 76.

A

Adams, NBP and Reid, JD (2013) The Allosteric Role of the AAA(+) Domain of ChlD Protein from the Magnesium Chelatase of Synechocystis Species PCC 6803. JOURNAL OF BIOLOGICAL CHEMISTRY, 288 (40). 28727 - 28732. ISSN 0021-9258

Anstey-Gilbert, C.S., Hemsworth, G.R., Flemming, C.S., Hodskinson, M.R.G., Zhang, J., Sedelnikova, S.E., Stillman, T.J., Sayers, J.R. and Artymiuk, P.J. (2013) The structure of Escherichia coli ExoIX—implications for DNA binding and catalysis in flap endonucleases. Nucleic Acids Research, 41 (17). pp. 8357-8367. ISSN 0305-1048

Artymiuk, P.J., Spriggs, R.V. and Willett, P. (2005) Graph theoretic methods for the analysis of structural relationships in biological macromolecules. Journal of the American Society for Information Science and Technology, 56 (5). pp. 518-528. ISSN 1532 - 2882

B

Bahatyrova, S., Frese, R.N., Siebert, A., Olsen, J.D., van der Werf, K.O., van Grondelle, R., Niederman, R.A., Bullough, P.A., Otto, C. and Hunter, C.N. (2004) The native architecture of a photosynthetic membrane. Nature, 430 (7003). pp. 1058-1062. ISSN 0028-0836

Bai, H, Rolfe, M.D, Jia, W, Coakley, S, Poole, R.K, Green, J and Holcombe, M (2014) Agent-Based Modeling of Oxygen-Responsive Transcription Factors in Escherichia coli. PLoS Computational Biology, 10 (4). e1003595. - .

Butler, J. Scott and Mitchell, Phil (2010) Rrp6, Rrp47 and co-factors of the nuclear exosome. In: Jensen, Torben Heick, (ed.) RNA Exosome. Advances in Experimental Medicine and Biology, 702 . Landes Bioscience , Austin, TX, USA , pp. 91-104. ISBN 978-1-4419-7840-0

C

Caballero-Lima, D, Kaneva, IN, Watton, SP, Sudbery, PE and Craven, CJ (2013) The Spatial Distribution of the Exocyst and Actin Cortical Patches Is Sufficient To Organize Hyphal Tip Growth. EUKARYOTIC CELL, 12 (7). 998 - 1008. ISSN 1535-9778

Caballero-Lima, D. and Sudbery, P.E. (2014) In Candida albicans phosphorylation of Exo84 by Cdk1-Hgc1 is necessary for efficient hyphal extension. Molecular Biology of the Cell.

Canniffe, D.P. and Neil Hunter, C. (2014) Engineered biosynthesis of bacteriochlorophyll b in Rhodobacter sphaeroides. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1837 (10). pp. 1611-1616. ISSN 0006-3002

Casson, S.A and Hetherington, A.M (2014) phytochrome B Is Required for Light-Mediated Systemic Control of Stomatal Development. Current Biology, 24 (11). pp. 1216-1221.

Charalambous, K., O'Reilly, A.O., Bullough, P.A. and Wallace, B.A. (2009) Thermal and chemical unfolding and refolding of a eukaryotic sodium channel. Biochimica et Biophysica Acta - Biomembranes, 1788 (6). pp. 1279-1286. ISSN 0005-2736

Chaudhuri, R., Allen, A., Owen, P., Shalom, G., Stone, K., Harrison, M., Burgis, T., Lockyer, M., Garcia-Lara, J., Foster, S., Pleasance, S., Peters, S., Maskell, D. and Charles, I. (2009) Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH). BMC Genomics, 10 (1). p. 291. ISSN 1471-2164

Chaudhuri, R.R., Peters, S.E., Pleasance, S.J., Northen, H., Willers, C., Paterson, G.K., Cone, D.B., Allen, A.G., Owen, P.J., Shalom, G., Stekel, D.J., Charles, I.G., Maskell, D.J. and Stebbins, C.E. (2009) Comprehensive Identification of Salmonella enterica Serovar Typhimurium Genes Required for Infection of BALB/c Mice. PLoS Pathogens, 5 (7). e1000529. ISSN 1553-7374

Cliff, M.J., Craven, C.J., Marston, J.P., Hounslow, A.M., Clarke, A.R. and Waltho, J.P. (2009) The denatured state of N-PGK is compact and predominantly disordered. Journal of Molecular Biology, 385 (1). pp. 266-277. ISSN 0022-2836

D

Davidge, K.S., Sanguinetti, G., Yee, C.H., Cox, A.G., McLeod, C.W., Monk, C.E., Mann, B.E., Motterlini, R. and Poole, R.K. (2009) Carbon monoxide-releasing antibacterial molecules target respiration and global transcriptional regulators. Journal of Biological Chemistry, 284 (7). pp. 4516-4524. ISSN 0021-9258

Davison, P.A., Hunter, C.N. and Horton, P. (2002) Overexpression of beta-carotene hydroxylase enhances stress tolerance in Arabidopsis. Nature, 418 (6894). pp. 203-206. ISSN 0028-0836

Deakin, L.J., Clare, S., Fagan, R.P., Dawson, L.F., Pickard, D.J., West, M.R., Wren, B.W., Fairweather, N.F., Dougan, G. and Lawley, T.D. (2012) The Clostridium difficile spo0A gene is a persistence and transmission factor. Infection and Immunity, 80 (8). 2704 - 2711.

Doheny-Adams, T., Hunt, L., Franks, P. J., Beerling, D. J. and Gray, J. E. (2012) Genetic manipulation of stomatal density influences stomatal size, plant growth and tolerance to restricted water supply across a growth carbon dioxide gradient. Philosophical Transactions of the Royal Society B: Biological Sciences, 367 (1588). p. 547. ISSN 0962-8436

E

Elhaddad, N.S, Hunt, L, Sloan, J and Gray, J.E (2014) Light-Induced Stomatal Opening Is Affected by the Guard Cell Protein Kinase APK1b. PLoS One, 9 (5). e97161 . - .

F

Fagan, R..P and Fairweather, N.F. (2011) Clostridium difficile has two parallel and essential Sec secretion systems. The Journal of Biological Chemistry, 286 (31). 27483 - 27493.

Fagan, R.P., Lambert, M.A. and Smith, S.G. (2008) The hek outer membrane protein of Escherichia coli strain RS218 binds to proteoglycan and utilizes a single extracellular loop for adherence, invasion, and autoaggregation. Infection and Immunity, 76 (3). 1135 - 1142.

Fakieh, M.H., Drake, P.J., Lacey, J., Munck, J.M., Motley, A.M. and Hettema, E.H. (2013) Intra-ER sorting of the peroxisomal membrane protein Pex3 relies on its luminal domain. Biology Open, 2 (8). 829 - 837.

Fedorova, N.D., Khaldi, N., Joardar, V.S., Maiti, R., Amedeo, P., Anderson, M.J., Crabtree, J., Silva, J.C., Badger, J.H., Albarraq, A., Angiuoli, S., Bussey, H., Bowyer, P., Cotty, P.J., Dyer, P.S., Egan, A., Galens, K., Fraser-Liggett, C.M., Haas, B.J., Inman, J.M., Kent, R., Lemieux, S., Malavazi, I., Orvis, J., Roemer, T., Ronning, C.M., Sundaram, J.P., Sutton, G., Turner, G., Venter, J.C., White, O.R., Whitty, B.R., Youngman, P., Wolfe, K.H., Goldman, G.H., Wortman, J.R., Jiang, B., Denning, D.W., Nierman, W.C. and Richardson, P.M. (2008) Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus. PLoS Genetics, 4 (4). e1000046. ISSN 1553-7404

Feigenbutz, M, Garland, W, Turner, M and Mitchell, PJ (2013) The exosome cofactor Rrp47 is critical for the stability and normal expression of its associated exoribonuclease Rrp6 in Saccharomyces cerevisiae. PLOS One, 8 (11). e80752. ISSN 1932-6203

Frost, J.M., Udayashankar, R., Moore, H.D. and Moore, G.E. (2010) Telomeric NAP1L4 and OSBPL5 of the KCNQ1 cluster, and the DECORIN gene are not imprinted in human trophoblast stem cells. Plos One, 5 (7). Art no.e11595 . ISSN 1932-6203

G

Gaizauskas, R., Demetriou, G., Artymiuk, P.J. and Willett, P. (2003) Protein structures and information extraction from biological texts: The PASTA system. Bioinformatics, 19 (1). 135 - 143. ISSN 1367-4803

Gardiner, E.J., Willett, P. and Artymiuk, P.J. (2003) GAPDOCK: A genetic algorithm approach to protein docking in CAPRI round 1. Proteins: Structure, Function, and Genetics, 52 (1). pp. 10-14.

Graham, A.I., Hunt, S., Stokes, S.L., Bramall, N., Bunch, J., Cox, A.G., McLeod, C.W. and Poole, R.K. (2009) Severe zinc depletion of escherichia coli: roles for high affinity zinc binding by ZinT, zinc transport and zinc-independent proteins. Journal of Biological Chemistry, 284 (27). pp. 18377-18389. ISSN 0021-9258

Green, J, Stapleton, M.R, Smith, L.J, Artymiuk, P.J, Kahramanoglou, C, Hunt, D.M and Buxton, R.S (2014) Cyclic-AMP and bacterial cyclic-AMP receptor proteins revisited: adaptation for different ecological niches. Curr ent Opinion in Microbiology, 18. 1 - 7.

H

Harrison, A-M., South, D.R., Willett, P. and Artymiuk, P.J. (2004) Representation, searching and discovery of patterns of bases in complex RNA structures. Journal of Computer-Aided Molecular Design, 17 (8). pp. 537-549. ISSN 1573-4951

Hettema, E.H., Erdmann, R., van der Klei, I. and Veenhuis, M. (2014) Evolving models for peroxisome biogenesis. Current Opinion in Cell Biology, 29C. 25 - 30.

Howlett, R.M, Kelly, D.J, Davey, M.P and Paul Quick, W (2014) Metabolomic analysis of the food-borne pathogen Campylobacter jejuni: application of direct injection mass spectrometry for mutant characterisation. Metabolomics. 1 - 10. ISSN 1573-3882

J

Jesse, H.E., Nye, T.L., McLean, S., Green, J., Mann, B.E. and Poole, R.K. (2013) Cytochrome bd-I in Escherichia coli is less sensitive than cytochromes bd-II or bo '' to inhibition by the carbon monoxide-releasing molecule, CORM-3 N-acetylcysteine reduces CO-RM uptake and inhibition of respiration. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 1834 (9). 1693 - 1703. ISSN 1570-9639

Johnson, M.P. and Ruban, A.V. (2014) Rethinking the existence of a steady-state Delta psi component of the proton motive force across plant thylakoid membranes. Photosynthesis Research, 119 (1-2). 233 - 242. ISSN 0166-8595

Johnson, R., Borde, V., Neale, M.J., Bishop-Bailey, A., North, M., Harris, S., Nicolas, A. and Goldman, A.S.H. (2007) Excess Single-Stranded DNA Inhibits Meiotic Double-Strand Break Repair. PLoS Genetics, 3 (11). e223. ISSN 1553-7390

K

Kendall, JJ, Barrero-Tobon, AM, Hendrixson, DR and Kelly, DJ (2013) Hemerythrins in the microaerophilic bacterium Campylobacter jejuni help protect key iron-sulphur cluster enzymes from oxidative damage. Environmental Microbiology, 16 (4). pp. 1105-1121.

L

Liu, Y.W., Hitchcock, A., Salmon, R.C. and Kelly, D.J. (2014) It takes two to tango: two TatA paralogues and two redox enzyme-specific chaperones are involved in the localization of twin-arginine translocase substrates in Campylobacter jejuni. Microbiology, 160 (Pt 9). 2053 - 2066.

Liu, Zai-Qing, Deng, Guo-Min, Foster, Simon and Tarkowski, Andrej (2001) Staphylococcal peptidoglycans induce arthritis. Arthritis Research and Therapy, 3 (6). pp. 375-380. ISSN 1478-6354

M

Mahon, V., Fagan, R.P. and Smith, S.G. (2012) Snap denaturation reveals dimerization by AraC-like protein Rns. Biochimie, 94 (9). 2058 - 2061.

Mesnage, S., Dellarole, M., Baxter, N.J., Rouget, J.B., Dimitrov, J.D., Wang, N., Fujimoto, Y., Hounslow, A.M., Lacroix-Desmazes, S., Fukase, K., Foster, S.J. and Williamson, M.P. (2014) Molecular basis for bacterial peptidoglycan recognition by LysM domains. Nature Communications, 5. 4269 .

Mitchell, Phil (2010) Rrp47 and the function of the Sas10/C1D domain. Biochemical Society Transactions, 38. pp. 1088-1092. ISSN 0300-5127

Mitchell, Phil and Tollervey, David (2010) Finding the Exosome. In: Jensen, T. H., (ed.) RNA Exosome. Advances in Experimental Medicine and Biology, 702 . Landes Bioscience , Austin, TX, USA , pp. 1-8. ISBN 978-1-4419-7840-0

Moody, R.G., Phillips-Jones, M.K. and Williamson, M.P. (2007) NMR assignment of the Rhodobacter sphaeroides fasciclin-1 domain protein (Fdp). Biomolecular NMR Assignments, 1 (1). pp. 11-12. ISSN 1874-270X

Moody, Robert G. and Williamson, Mike P. (2013) Structure and function of a bacterial Fasciclin I Domain Protein elucidates function of related cell adhesion proteins such as TGFBIp and periostin. FEBS Open Bio, 3. pp. 71-77. ISSN ISSN: 2211-5463

Moore, H.D.M., Martin, M. and Birkhead, T.R. (1999) No evidence for killer sperm or other selective interactions between human spermatozoa in ejaculates of different males in vitro. Proceedings of the Royal Society Series B: Biological Sciences, 266 (1436). p. 2343. ISSN 1471-2954

Munck, J.M., Motley, A.M., Nuttall, J.M. and Hettema, E.H. (2009) A dual function for Pex3p in peroxisome formation and inheritance. Journal of Cell Biology, 187 (4). pp. 463-471. ISSN 0021-9525

N

Nadzirin, N., Willett, P., Artymiuk, P.J. and Firdaus-Raih, M. (2013) IMAAAGINE: a webserver for searching hypothetical 3D amino acid side chain arrangements in the Protein Data Bank. Nucleic Acids Research, 41 (W1). W432 - W440.

Nakazawa, Y., Suzuki, Y., Williamson, M.P., Saito, H. and Asakura, T. (2009) The interaction of amyloid A beta(1-40) with lipid bilayers and ganglioside as studied by P-31 solid-state NMR. Chemistry and Physics of Lipids, 158 (1). pp. 54-60. ISSN 0009-3084

Nuttall, J.M, Motley, A.M and Hettema, E.H (2014) Deficiency of the exportomer components Pex1, Pex6, and Pex15 causes enhanced pexophagy in Saccharomyces cerevisiae. Autophagy, 10 (5). ISSN 1554-8627

P

Pettit, L.J., Browne, H.P., Yu, L., Smits, W.K., Fagan, R.P., Barquist, L., Martin, M.J., Goulding, D., Duncan, S.H., Flint, H.J., Dougan, G., Choudhary, J.S. and Lawley, T.D. (2014) Functional genomics reveals that Clostridium difficile Spo0A coordinates sporulation, virulence and metabolism. BMC Genomics, 15. 160 - 160. ISSN 1471-2164

Prajsnar, TK, Renshaw, SA, Ogryzko, NV, Foster, SJ, Serror, P and Mesnage, S (2013) Zebrafish as a Novel Vertebrate Model To Dissect Enterococcal Pathogenesis. INFECTION AND IMMUNITY, 81 (11). 4271 - 4279. ISSN 0019-9567

R

Reynolds, C.B., Emerson, J.E., de la Riva, L., Fagan, R.P. and Fairweather, N.F. (2011) The Clostridium difficile cell wall protein CwpV is antigenically variable between strains, but exhibits conserved aggregation-promoting function. PLoS Pathogens, 7 (4). e1002024 .

Rock, J.D., Mahnane, M.R., Anjum, M.F., Shaw, J.G., Read, R.C. and Moir, J.W.B. (2005) The pathogen Neisseria meningitidis requires oxygen, but supplements growth by denitrification. Nitrite, nitric oxide and oxygen control respiratory flux at genetic and metabolic levels. Molecular Microbiology, 58 (3). pp. 800-809. ISSN 0950-382X

Ruban, A.V., Wentworth, M., Yakushevska, A.E., Andersson, J., Lee, P.J., Keegstra, W., Dekker, J.P., Boekema, E.J., Jansson, S. and Horton, P. (2003) Plants lacking the main light-harvesting complex retain photosystem II macro-organization. Nature, 421 (6923). pp. 648-652. ISSN 0028-0836

S

Salmon, Robert C., Cliff, Matthew J., Rafferty, John B. and Kelly, David J. (2013) The CouPSTU and TarPQM transporters in Rhodopseudomonas palustris: Redundant, promiscuous uptake systems for lignin-derived aromatic substrates. PLoS One, 8 (3).

Savage, N.S., Walker, T., Wieckowski, Y., Schiefelbein, J., Dolan, L., Monk, N.A.M. and Weigel, D. (2008) A Mutual Support Mechanism through Intercellular Movement of CAPRICE and GLABRA3 Can Pattern the Arabidopsis Root Epidermis. PLoS Biology, 6 (9). e235. ISSN 1544-9173

Senior, A. and Moir, A. (2008) The Bacillus cereus GerN and GerT protein homologs have distinct roles in spore germination and outgrowth, respectively. Journal of Bacteriology, 190 (18). pp. 6148-6152. ISSN 0021-9193

Severi, E., Randle, G., Kivlin, P. and Whitfield, K. (2005) Sialic acid transport in Haemophilus influenzae is essential for lipopolysaccharide sialylation and serum resistance and is dependent on a novel tripartite ATP-independent periplasmic transporter. Molecular Microbiology, 58 (4). pp. 1173-1185. ISSN 0950-382X

Smith, L.M., Bomblies, K. and Weigel, D. (2011) Complex evolutionary events at a tandem cluster of arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. PLoS Genetics, 7 (7). ISSN 1553-7390

Sudbery, P. (2008) Regulation of polarised growth in fungi. Fungal Biology Reviews, 22 (2). pp. 44-55. ISSN 1749-4613

T

Tiyawisutsri, R., Holden, M.T.G., Tumapa, S., Rengpipat, S., Clarke, S.R., Foster, S.J., Nierman, W.C., Day, N.P.J. and Peacock, S.J. (2007) Burkholderia Hep_Hag autotransporter (BuHA) proteins elicit a strong antibody response during experimental glanders but not human melioidosis. BMC Microbiology, 7 (Art.No). ISSN 1471-2180

Tomlinson, R.A., Ullah, S., Hansen, P.E. and Williamson, M.P. (2009) Characterization of salt bridges to lysines in the protein G B1 domain. Journal of the American Chemical Society, 131 (13). pp. 4674-4684. ISSN 0002-7863

Turner, RD, Foster, SJ and Vollmer, W (2014) Different walls for rods and balls: The diversity of peptidoglycan. Molecular Microbiology, 91 (5). 862 - 874. ISSN 0950-382X

W

Wainwright, M., Al-Wajeeh, K., Wickramasinghe, N.C. and Narlikar, J.V. (2003) Did silicon aid in the establishment of the first bacterium? International Journal of Astrobiology, 2 (3). pp. 227-229. ISSN 1473-5504

Wainwright, M., AlWajeeh, K. and Grayston, S.J. (1997) Effect of silicic acid and other silicon compounds on fungal growth in oligotrophic and nutrient-rich media. Mycological Research, 101 (8). pp. 933-938. ISSN 1473-5504

Wainwright, M., Alharbi, S. and Wickramasinghe, N.C. (2006) How do microorganisms reach the stratosphere? International Journal of Astrobiology, 5 (1). pp. 13-15. ISSN 1473-5504

Wainwright, M., Laswd, A. and Alshammari, F. (2009) Bacteria in amber coal and clay in relation to lithopanspermia. International Journal of Astrobiology, 8 (2). pp. 141-143. ISSN 1473-5504

Wainwright, M., Wickramasinghe, N.C., Narlikar, J.V., Rajaratnam, P. and Perkins, J. (2004) Confirmation of the presence of viable but non-cultureable bacteria in the stratosphere. International Journal of Astrobiology, 3 (1). pp. 13-15. ISSN 1473-5504

Wang, X., Weigel, D. and Smith, L.M. (2013) Transposon variants and their effects on gene expression in arabidopsis. PLoS Genetics, 9 (2). e1003255. ISSN 1553-7404

Williamson, M.P. and Craven, C.J. (2009) Automated protein structure calculation from NMR data. Journal of Biomolecular NMR, 43 (3). pp. 131-143. ISSN 0925-2738

Wilson, J.L, Jesse, H.E, Hughes, B, Lund, V, Naylor, K, Davidge, K.S, Cook, G.M, Mann, B.E and Poole, R.K (2013) Ru(CO)(3)Cl(Glycinate) (CORM-3): A Carbon Monoxide-Releasing Molecule with Broad-Spectrum Antimicrobial and Photosensitive Activities Against Respiration and Cation Transport in Escherichia coli. Antioxidants and Redox Signaling, 19 (5). 497 - 509. ISSN 1523-0864

Wilson, T, Costa, P.J, Felix, V, Williamson, M.P and Thomas, J.A (2013) Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to an Antiparallel Folded Human Telomere Sequence. Journal of Medicinal Chemistry, 56 (21). 8674 - 8683. ISSN 0022-2623

Wilton, D.J., Kitahara, R., Akasaka, A. and Williamson, M.P. (2009) Pressure-dependent 13C chemical shifts in proteins: Origins and applications. Journal of Biomolecular NMR, 44 (1). pp. 25-33. ISSN 0925-2738

Wood, N.J., Alizadeh, T., Richardson, D.J., Ferguson, S.J. and Moir, J.W.B. (2002) Two domains of a dual-function NarK protein are required for nitrate uptake, the first step of denitrification in Paracoccus pantotrophus. Molecular Microbiology, 44 (1). pp. 157-170. ISSN 0950-382X

Y

Yassaee, Vahid R., Zeinali, Sirous, Harirchi, Iraj, Jarvandi, Soghra, Mohagheghi, Mohammad A., Hornby, David P. and Dalton, Ann (2002) Novel mutations in the BRCA1 and BRCA2 genes in Iranian women with early-onset breast cancer. Breast Cancer Research, 4 (4). ISSN 1465-542X

Ying, K, Zimmerman, W.B and Gilmour, D.J (2014) Effects of CO and pH on growth of the microalga Dunaliella salina. Journal of Microbial and Biochemical Technology, 6 (3). 167 - 173.

This list was generated on Wed Oct 1 04:35:10 2014 BST.