Items where authors include "Treanor, D"

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Number of items: 75.

Article

Clarke, EL, Wade, RG, Magee, D et al. (2 more authors) (2023) Image analysis of cutaneous melanoma histology: a systematic review and meta-analysis. Scientific Reports, 13. 4774. ISSN 2045-2322

Broad, A orcid.org/0000-0001-7131-6860, Wright, AI, de Kamps, M orcid.org/0000-0001-7162-4425 et al. (1 more author) (2022) Attention-guided sampling for colorectal cancer analysis with digital pathology. Journal of Pathology Informatics, 13. 100110. ISSN 2229-5089

Clarke, E, Doherty, D, Randell, R et al. (4 more authors) (2022) Faster than light (microscopy): superiority of digital pathology over microscopy for assessment of immunohistochemistry. Journal of Clinical Pathology. ISSN 0021-9746

Elsharif, M, Roche, M, Wilson, D et al. (11 more authors) (2021) Hepatectomy risk assessment with functional magnetic resonance imaging (HEPARIM). BMC Cancer, 21 (1). 1139. ISSN 1471-2407

Tempest, N, Jansen, M, Baker, A et al. (6 more authors) (2020) Histological 3D reconstruction and in vivo lineage tracing of the human endometrium. The Journal of Pathology, 251 (4). pp. 440-451. ISSN 0022-3417

Clarke, EL, Munnings, C, Williams, B et al. (2 more authors) (2020) Display evaluation for primary diagnosis using digital pathology. Journal of Medical Imaging, 7 (02). p. 1. ISSN 2329-4302

Williams, BJ, Brettle, D, Aslam, M et al. (8 more authors) (2020) Guidance for Remote Reporting of Digital Pathology Slides During Periods of Exceptional Service Pressure: An Emergency Response from the UK Royal College of Pathologists. Journal of Pathology Informatics, 11 (1). 12. ISSN 2229-5089

Clarke, EL, Brettle, D, Sykes, A et al. (3 more authors) (2019) Development and Evaluation of a Novel Point-of-Use Quality Assurance Tool for Digital Pathology. Archives of Pathology and Laboratory Medicine, 143 (10). pp. 1246-1255. ISSN 0003-9985

Lindman, K, Rose, JF, Lindvall, M et al. (2 more authors) (2019) Annotations, ontologies, and whole slide images – Development of an annotated ontology-driven whole slide image library of normal and abnormal human tissue. Journal of Pathology Informatics, 10 (1). 22. 22-. ISSN 2229-5089

Williams, BJ, Jayewardene, D and Treanor, D orcid.org/0000-0002-4579-484X (2019) Digital immunohistochemistry implementation, training and validation: experience and technical notes from a large clinical laboratory. Journal of Clinical Pathology, 72 (5). pp. 373-378. ISSN 0021-9746

Williams, BJ, Bottoms, D, Clark, D et al. (1 more author) (2019) Future-proofing pathology part 2: building a business case for digital pathology. Journal of Clinical Pathology, 72 (3). pp. 198-205. ISSN 0021-9746

Falk, M, Ynnerman, A, Treanor, D orcid.org/0000-0002-4579-484X et al. (1 more author) (2019) Interactive Visualization of 3D Histopathology in Native Resolution. IEEE Transactions on Visualisation and Computer Graphics, 25 (1). pp. 1008-1017. ISSN 1077-2626

Capitanio, A, Dina, RE and Treanor, D orcid.org/0000-0002-4579-484X (2018) Digital cytology: A short review of technical and methodological approaches and applications. Cytopathology, 29 (4). pp. 317-325. ISSN 0956-5507

Williams, BJ, Lee, J, Oien, KA et al. (1 more author) (2018) Digital pathology access and usage in the UK: results from a national survey on behalf of the National Cancer Research Institute's CM-Path initiative. Journal of Clinical Pathology, 71 (5). pp. 463-466. ISSN 0021-9746

Clarke, EL, Revie, C, Brettle, D et al. (6 more authors) (2018) Development of a novel tissue-mimicking color calibration slide for digital microscopy. Color Research and Application, 43 (2). pp. 184-197. ISSN 0361-2317

Williams, BJ, Hanby, A orcid.org/0000-0001-7966-1570, Millican-Slater, R et al. (3 more authors) (2018) Digital Pathology for the Primary Diagnosis of Breast Histopathological Specimens: An Innovative Validation and Concordance Study. Histopathology, 72 (4). pp. 662-671. ISSN 0309-0167

Dessauvagie, BF, Lee, AHS, Meehan, K et al. (8 more authors) (2018) Interobserver variation in the diagnosis of fibroepithelial lesions of the breast: a multicentre audit by digital pathology. Journal of Clinical Pathology, 71 (8). pp. 672-679. ISSN 0021-9746

Hutchins, GGA orcid.org/0000-0002-1707-4415, Treanor, D orcid.org/0000-0002-4579-484X, Wright, A et al. (9 more authors) (2018) Intra-tumoural stromal morphometry predicts disease recurrence but not response to 5-fluorouracil – results from the QUASAR trial of colorectal cancer. Histopathology, 72 (3). pp. 391-404. ISSN 0309-0167

Williams, BJ, Bottoms, D and Treanor, D orcid.org/0000-0002-4579-484X (2017) Future-proofing pathology: the case for clinical adoption of digital pathology. Journal of Clinical Pathology, 70 (12). pp. 1010-1018. ISSN 0021-9746

Williams, BJ, DaCosta, P, Goacher, E et al. (1 more author) (2017) A Systematic Analysis of Discordant Diagnoses in Digital Pathology Compared With Light Microscopy. Archives of Pathology & Laboratory Medicine, 141 (12). pp. 1712-1718. ISSN 0003-9985

Homeyer, A, Nasr, P, Engel, C et al. (9 more authors) (2017) Automated quantification of steatosis: agreement with stereological point counting. Diagnostic Pathology, 12. 80. ISSN 1746-1596

Koppal, S, Warntjes, M, Swann, J et al. (10 more authors) (2017) Quantitative fat and R2* mapping in vivo to measure lipid-rich necrotic core and intraplaque hemorrhage in carotid atherosclerosis. Magnetic Resonance in Medicine, 78 (1). pp. 285-296. ISSN 0740-3194

O'Shea, SJ, Merchant, W, Laye, J et al. (5 more authors) (2017) Transcriptomic profiling the microenvironment in primary melanoma. Pigment Cell and Melanoma Research, 30 (1). p. 127. ISSN 1755-148X

Clarke, EL and Treanor, D orcid.org/0000-0002-4579-484X (2017) Colour in Digital Pathology: A Review. Histopathology, 70 (2). pp. 153-163. ISSN 0309-0167

Griffin, J and Treanor, D orcid.org/0000-0002-4579-484X (2017) Digital pathology in clinical use: where are we now and what is holding us back? Histopathology, 70 (1). pp. 134-145. ISSN 0309-0167

Goacher, E, Randell, R orcid.org/0000-0002-5856-4912, Williams, B et al. (1 more author) (2017) The diagnostic concordance of whole slide imaging and light microscopy: a systematic review. Archives of Pathology & Laboratory Medicine, 141 (1). pp. 151-161. ISSN 0003-9985

Hale, MD, Nankivell, M, Hutchins, GG et al. (11 more authors) (2016) Biopsy proportion of tumour predicts pathological tumour response and benefit from chemotherapy in resectable oesophageal carcinoma –results from the UK MRC OE02 trial. Oncotarget, 7 (47). pp. 77565-77575. ISSN 1949-2553

Clarke, EL, Mello-Thoms, C, Magee, D et al. (1 more author) (2016) A response to Campbell WS, Talmon GA, Foster KW, Lele SM, Kozel JA, West WW. Sixty-five thousand shades of gray: importance of color in surgical pathology diagnoses. HUM PATHOL 2015;6:1945-50. Human Pathology, 56. pp. 204-205. ISSN 0046-8177

Williams, BJ and Treanor, D orcid.org/0000-0002-4579-484X (2016) A novel leadership fellowship in digital pathology. Journal of Pathology Informatics, 7. 39. ISSN 2229-5089

Kraima, AC, West, NP orcid.org/0000-0002-0346-6709, Treanor, D et al. (6 more authors) (2016) The anatomy of the perineal body in relation to abdominoperineal excision for low rectal cancer. Colorectal Disease, 18 (7). pp. 688-695. ISSN 1462-8910

Finlay, S, Seedhom, BB, Carey, D et al. (3 more authors) (2016) In-vitro engineering of high modulus cartilage-like constructs. Tissue engineering. Part C, Methods, 22 (4). ISSN 1937-3384

McCarthy, R, Orsi, NM, Treanor, D et al. (6 more authors) (2016) Three-dimensional digital reconstruction of human placental villus architecture in normal and complicated pregnancies. European Journal of Obstetrics and Gynecology and Reproductive Biology, 197. pp. 130-135. ISSN 0301-2115

Ruddle, RA, Thomas, RG, Randell, R orcid.org/0000-0002-5856-4912 et al. (2 more authors) (2016) The design and evaluation of interfaces for navigating gigapixel images in digital pathology. ACM Transactions on Computer-Human Interaction, 23 (1). 5. ISSN 1073-0516

Liang, Y, Wang, F, Treanor, D et al. (5 more authors) (2016) A framework for 3D vessel analysis using whole slide images of liver tissue sections. International Journal of Computational Biology and Drug Design, 9 (1/2). pp. 102-119. ISSN 1756-0756

Kraima, AC, West, NP, Treanor, D et al. (6 more authors) (2015) Understanding the surgical pitfalls in total mesorectal excision: Investigating the histology of the perirectal fascia and the pelvic autonomic nerves. EJSO - European Journal of Surgical Oncology, 41 (12). pp. 1621-1629. ISSN 0748-7983

Booth, ME, Nash, CE, Roberts, NP et al. (4 more authors) (2015) 3-D tissue modelling and virtual pathology as new approaches to study ductal carcinoma in situ. Alternatives to Laboratory Animals, 43 (6). pp. 377-383. ISSN 0261-1929

Wijayathunga, VN, Ridgway, JP, Ingham, E et al. (6 more authors) (2015) A non-destructive method to distinguish the internal constituent architecture of the intervertebral discs using 9.4 Tesla Magnetic Resonance Imaging. Spine, 40 (24). E1315-E1322. ISSN 0362-2436

Randell, R orcid.org/0000-0002-5856-4912, Ruddle, RA, Thomas, RG et al. (1 more author) (2015) Response to Rojo and Bueno: “Analysis of the impact of high resolution monitors in digital pathology”. Journal of Pathology Informatics, 6 (1). 58. ISSN 2229-5089

Brown, P, Toh, E, Smith, K et al. (5 more authors) (2015) New insights into the lymphovascular microanatomy of the colon and the risk of metastases in pT1 colorectal cancer obtained with quantitative methods and three-dimensional digital reconstruction. Histopathology, 67 (2). pp. 167-175. ISSN 0309-0167

Booth, M, Treanor, D, Roberts, N et al. (3 more authors) (2015) Three dimensional reconstruction of ductal carcinoma in situ using virtual slides. Histopathology, 66 (7). 966 - 973. ISSN 0309-0167

Kraima, AC, West, NP, Treanor, D et al. (5 more authors) (2015) Whole mount microscopic sections reveal that Denonvilliers' fascia is one entity and adherent to the mesorectal fascia; Implications for the anterior plane in total mesorectal excision? European Journal of Surgical Oncology, 41 (6). 738 - 745. ISSN 0748-7983

Nash, CE, Mavria, G, Baxter, EW et al. (7 more authors) (2015) Development and characterisation of a 3D multi-cellular in vitro model of normal human breast: a tool for cancer initiation studies. Oncotarget.

Ruddle, RA, Thomas, RG, Randell, RS et al. (2 more authors) (2015) Performance and interaction behaviour during visual search on large, high-resolution displays. Information Visualization, 14 (2). 137 - 147. ISSN 1473-8716

Randell, RS, Ruddle, RA and Treanor, D (2015) Barriers and facilitators to the introduction of digital pathology for diagnostic work. Studies in Health Technology and Informatics, 216. 443 - 447. ISSN 0926-9630

Magee, DR, Song, Y, Gilbert, S et al. (5 more authors) (2015) Histopathology in 3D: from three-dimensional reconstruction to multi-stain and multi-modal analysis. Journal of Pathology Informatics, 6 (6). ISSN 2229-5089

Badano, A, Revie, C, Casertano, A et al. (21 more authors) (2015) Consistency and Standardization of Color in Medical Imaging: a Consensus Report. Journal of Digital Imaging, 28 (1). pp. 41-52. ISSN 0897-1889

Randell, R, Ambepitiya, T, Mello-Thoms, C et al. (4 more authors) (2015) Effect of display resolution on time to diagnosis with virtual pathology slides in a systematic search task. Journal of Digital Imaging, 28 (1). 68 - 76. ISSN 0897-1889

Randell, R orcid.org/0000-0002-5856-4912, Ruddle, RA, Thomas, RG et al. (2 more authors) (2014) Diagnosis of major cancer resection specimens with virtual slides: Impact of a novel digital pathology workstation. Human Pathology, 45 (10). pp. 2101-2106. ISSN 0046-8177

Khan, AM, Rajpoot, N, Treanor, D orcid.org/0000-0002-4579-484X et al. (1 more author) (2014) A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution. IEEE Transactions on Biomedical Engineering, 61 (6). pp. 1729-1738. ISSN 0018-9294

Song, Y, Treanor, D, Bulpitt, AJ et al. (4 more authors) (2014) Unsupervised content classification based non-rigid registration of differently stained histology images. IEEE Transactions on Biomedical Engineering, 61 (1). ISSN 0018-9294

Young, AL, Chalmers, CR, Hawcroft, G et al. (5 more authors) (2013) Regional differences in prostaglandin E₂ metabolism in human colorectal cancer liver metastases. BMC Cancer, 13. 92. ISSN 1471-2407

Zhou, Y, Magee, DR, Treanor, D et al. (1 more author) (2013) Stain guided mean-shift filtering in automatic detection of human tissue nuclei. Journal of Pathology Informatics, 4 (1). ISSN 2229-5089

Randell, R orcid.org/0000-0002-5856-4912, Ruddle, RA, Mello-Thoms, C et al. (3 more authors) (2013) Virtual reality microscope versus conventional microscope regarding time to diagnosis: an experimental study. Histopathology, 62 (2). pp. 351-358. ISSN 0309-0167

Song, Y, Treanor, D, Bulpitt, AJ et al. (1 more author) (2013) 3D reconstruction of multiple stained histology images. Journal of Pathology Informatics, 4 (Supple). 1 - 5. ISSN 2229-5089

Randell, R, Ruddle, RA, Thomas, R et al. (1 more author) (2012) Diagnosis at the microscope: A workplace study of histopathology. Cognition, Technology and Work, 14 (4). 319 - 335 . ISSN 1435-5558

Roberts, N, Magee, D, Song, Y et al. (7 more authors) (2012) Towards Routine Use of 3D Histopathology As a Research Tool. American Journal of Pathology, 180 (5). 1835 - 1842. ISSN 0002-9440

Randell, R, Ruddle, RA, Quirke, P et al. (2 more authors) (2012) Working at the microscope: analysis of the activities involved in diagnostic pathology. Histopathology, 60 (3). 504 - 510 . ISSN 0309-0167

West, NP orcid.org/0000-0002-0346-6709, Dattani, M, McShane, P et al. (6 more authors) (2010) The proportion of tumour cells is an independent predictor for survival in colorectal cancer patients. British Journal of Cancer, 102 (10). pp. 1519-1523. ISSN 0007-0920

Treanor, D orcid.org/0000-0002-4579-484X, Jordan-Owers, N, Hodrien, J et al. (3 more authors) (2009) Virtual reality Powerwall versus conventional microscope for viewing pathology slides: an experimental comparison. Histopathology, 55 (3). pp. 294-300. ISSN 0309-0167

Treanor, D, Lim, C, Magee, D et al. (2 more authors) (2009) Tracking with virtual slides: a tool to study diagnostic error in histopathology. Histopathology, 55 (1). 37 - 45. ISSN 0309-0167

Conference or Workshop Item

Keighley, J orcid.org/0000-0002-3647-0683, de Kamps, M orcid.org/0000-0001-7162-4425, Wright, A et al. (1 more author) (2023) Digital pathology whole slide image compression with Vector Quantized Variational Autoencoders. In: SPIE Medical Imaging 2023 (MI23).

Proceedings Paper

Keighley, J orcid.org/0000-0002-3647-0683, de Kamps, M orcid.org/0000-0001-7162-4425, Wright, A et al. (1 more author) (2023) Digital pathology whole slide image compression with Vector Quantized Variational Autoencoders. In: Medical Imaging 2023: Digital and Computational Pathology. SPIE Medical Imaging 2023, 19-24 Feb 2023, San Diego, USA. SPIE .

Clarke, EL, Munnings, C, Williams, B et al. (2 more authors) (2019) A Display Evaluation for Primary Diagnosis using Digital Pathology. In: Journal of Pathology. 12th Joint Meeting of the British Division of the International Academy of Pathology and the Pathological Society of Great Britain & Ireland, 02-04 Jul 2019, Harrogate, UK. Wiley-Blackwell , S21-S21.

Biswas, S, Davis, H, Jansen, M et al. (2 more authors) (2017) Aberrant expression of grem1 leads to ectopic stem cells capable of multilineage potential. In: Gut. British Society of Gastroenterology, Annual General Meeting, 19-22 Jun 2017, Manchester, UK. BMJ Publishing Group , A43-A44.

Wright, AI, Magee, D, Quirke, P orcid.org/0000-0002-3597-5444 et al. (1 more author) (2016) Incorporating Local and Global Context for Better Automated Analysis of Colorectal Cancer on Digital Pathology Slides. In: Procedia Computer Science. 20th Conference on Medical Image Understanding and Analysis (MIUA 2016), 06-08 Jul 2016, Loughborough University, UK. Elsevier , pp. 125-131.

Liang, Y, Wang, F, Treanor, D et al. (4 more authors) (2015) A 3D Primary Vessel Reconstruction Framework with Serial Microscopy Images. In: Navab, N, Hornegger, J, Wells, WM and Frangi, AF, (eds.) MICCAI 2015 Part III. Lecture Notes in Computer Science. 18th International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI), 05-09 Oct 2015, Munich, Germany. Springer International , pp. 251-259. ISBN 978-3-319-24573-7

ElMoursi, M, Simpson, NAB orcid.org/0000-0002-0758-7583, Stahlschmidt, J et al. (2 more authors) (2015) Digital pathology analysis reveals enhanced autophagy expression in pre-eclamptic placenta. In: BJOG: An International Journal of Obstetrics and Gynaecology. Blair Bell Research Society, 21-23 Jan 2015. Wiley , E2-E2.

ElMoursi, M, Speirs, V orcid.org/0000-0002-0602-4666, Stahlschmidt, J et al. (2 more authors) (2015) Trophoblast apoptotic burden in fetal growth restriction (FGR) placenta: an image analysis study. In: BJOG: An International Journal of Obstetrics and Gynaecology. Blair Bell Research Society, 21-23 Jan 2015. Wiley , E1-E2.

Kraima, AC, West, NP, Treanor, D et al. (6 more authors) (2015) The Anatomy of the Perineal Body in Relation to Abdominoperineal Excision for Low Rectal Cancer. In: Journal of Pathology. 8th Joint Meeting of the British Division of the International Academy of Pathology and the Pathological Society of Great Britain & Ireland, 23-25 Jun 2016, Dublin, Ireland. Wiley , S39-S39.

Kraima, AC, West, NP, Treanor, D et al. (7 more authors) (2015) The Three-Dimensional Anatomy of the Anal Sphincter Complex and its Relevance to Low Rectal and Anal Pathology. In: Journal of Pathology. 8th Joint Meeting of the British Division of the International Academy of Pathology and the Pathological Society of Great Britain & Ireland, 23-25 Jun 2015, Dublin, Ireland. Wiley , S14-S14.

Kraima, AC, West, NP, Treanor, D et al. (6 more authors) (2015) Whole-Mount Microscopic Sections Reveal that Denonvilliers' Fascia is One Entity and Adherent to the Mesorectal Fascia: Should we still Question the Anterior Plane in TME? In: Journal of Pathology. 8th Joint Meeting of the British Division of the International Academy of Pathology and the Pathological Society of Great Britain & Ireland, 23-25 Jun 2015, Dublin, Ireland. Wiley , S39-S39.

Carey, D, Wijayathunga, VN, Bulpitt, AJ et al. (1 more author) (2015) A Novel Approach for the Colour Deconvolution of Multiple Histological Stains. In: Lambrou, T and Ye, X, (eds.) Proceedings of the 19th Conference of Medical Image Understanding and Analysis. Medical Image Understanding and Analysis, 15-17 Jul 2015, Lincoln, UK. BMVA , 156 - 162. ISBN 1-901725-54-5

Liang, Y, Wang, F, Treanor, D et al. (4 more authors) (2015) Liver whole slide image analysis for 3D vessel reconstruction. In: IEEE International Symposium on Biomedical Imaging. IEEE International Symposium on Biomedical Imaging, 16-19 Apr 2015, New York, USA. Institute of Electrical and Electronics Engineers , 182 - 185. ISBN 978-1-4799-2374-8

Ruddle, RA, Fateen, W, Treanor, D et al. (2 more authors) (2013) Leveraging wall-sized high-resolution displays for comparative genomics analyses of copy number variation. In: BioVis 2013 - IEEE Symposium on Biological Data Visualization 2013, Proceedings. 2013 IEEE Symposium on Biological Data Visualization (BioVis), 13-14 Oct 2013, Atlanta, Georgia. IEEE , 89 - 96.

Magee, D orcid.org/0000-0003-2170-3103, Treanor, D, Crellin, D et al. (4 more authors) (2009) Colour Normalisation in Digital Histopathology Images. In: Elson, D and Rajpoot, N, (eds.) Optical Tissue Image Analysis in Microscopy, Histopathology and Endoscopy: OPTIMHisE. Optical Tissue Image Analysis in Microscopy, Histopathology and Endoscopy, 24 Sep 2009, London. MICCAI , pp. 100-111. ISBN 978-0-9563776-0-9

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