Krivov, SV (2013) Method to describe stochastic dynamics using an optimal coordinate. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics, 88 (6). 062131. ISSN 1539-3755
Abstract
A general method to describe the stochastic dynamics of Markov processes is suggested. The method aims to solve three related problems: the determination of an optimal coordinate for the description of stochastic dynamics; the reconstruction of time from an ensemble of stochastic trajectories; and the decomposition of stationary stochastic dynamics into eigenmodes which do not decay exponentially with time. The problems are solved by introducing additive eigenvectors which are transformed by a stochastic matrix in a simple way – every component is translated by a constant distance. Such solutions have peculiar properties. For example, an optimal coordinate for stochastic dynamics with detailed balance is a multivalued function. An optimal coordinate for a random walk on a line corresponds to the conventional eigenvector of the one-dimensional Dirac equation. The equation for the optimal coordinate in a slowly varying potential reduces to the Hamilton-Jacobi equation for the action function.
Metadata
Item Type: | Article |
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Authors/Creators: |
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Copyright, Publisher and Additional Information: | (c) 2013, American Physical Society. Reproduced in accordance with the publisher's self-archiving policy. |
Keywords: | Detailed balance; Dirac equations; Hamilton Jacobi equations; Optimal coordinate; Stochastic dynamics; Stochastic matrices; Stochastic trajectories |
Dates: |
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Institution: | The University of Leeds |
Academic Units: | The University of Leeds > Faculty of Biological Sciences (Leeds) > School of Molecular and Cellular Biology (Leeds) |
Depositing User: | Symplectic Publications |
Date Deposited: | 11 Feb 2014 10:18 |
Last Modified: | 17 Aug 2015 13:36 |
Published Version: | http://dx.doi.org/10.1103/PhysRevE.88.062131 |
Status: | Published |
Publisher: | American Physical Society |
Identification Number: | 10.1103/PhysRevE.88.062131 |
Related URLs: | |
Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:77626 |