Krivov, SV (2013) Method to describe stochastic dynamics using an optimal coordinate. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics, 88 (6). 062131. ISSN 1539-3755
Abstract
A general method to describe the stochastic dynamics of Markov processes is suggested. The method aims to solve three related problems: the determination of an optimal coordinate for the description of stochastic dynamics; the reconstruction of time from an ensemble of stochastic trajectories; and the decomposition of stationary stochastic dynamics into eigenmodes which do not decay exponentially with time. The problems are solved by introducing additive eigenvectors which are transformed by a stochastic matrix in a simple way – every component is translated by a constant distance. Such solutions have peculiar properties. For example, an optimal coordinate for stochastic dynamics with detailed balance is a multivalued function. An optimal coordinate for a random walk on a line corresponds to the conventional eigenvector of the one-dimensional Dirac equation. The equation for the optimal coordinate in a slowly varying potential reduces to the Hamilton-Jacobi equation for the action function.
Metadata
| Item Type: | Article | 
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| Authors/Creators: | 
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| Copyright, Publisher and Additional Information: | (c) 2013, American Physical Society. Reproduced in accordance with the publisher's self-archiving policy.  | 
        
| Keywords: | Detailed balance; Dirac equations; Hamilton Jacobi equations; Optimal coordinate; Stochastic dynamics; Stochastic matrices; Stochastic trajectories | 
| Dates: | 
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| Institution: | The University of Leeds | 
| Academic Units: | The University of Leeds > Faculty of Biological Sciences (Leeds) > School of Molecular and Cellular Biology (Leeds) | 
| Depositing User: | Symplectic Publications | 
| Date Deposited: | 11 Feb 2014 10:18 | 
| Last Modified: | 17 Aug 2015 13:36 | 
| Published Version: | http://dx.doi.org/10.1103/PhysRevE.88.062131 | 
| Status: | Published | 
| Publisher: | American Physical Society | 
| Identification Number: | 10.1103/PhysRevE.88.062131 | 
| Related URLs: | |
| Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:77626 | 
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