Items where authors include "Quirke, P."

Number of items: 43.

Article

Booth, M.E., Wood, H.M. orcid.org/0000-0003-3009-5904, Travis, M.A. et al. (3 more authors) (2025) The relationship between the gastric cancer microbiome and clinicopathological factors: a metagenomic investigation from the 100,000 genomes project and The Cancer Genome Atlas. Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association. ISSN 1436-3291

Brockmoeller, S.F. orcid.org/0000-0002-7452-5833, Slaney, H., Curd, A. et al. (6 more authors) (2025) Single-molecule localisation microscopy (SMLM) is feasible in human and animal formalin fixed paraffin embedded (FFPE) tissues in medical renal disease. Journal of Clinical Pathology. ISSN 0021-9746

Schoenpflug, L.A., Chatzipli, A., Sirinukunwattana, K. et al. (23 more authors) (2025) Tumour purity assessment with deep learning in colorectal cancer and impact on molecular analysis. The Journal of Pathology, 265 (2). pp. 184-197. ISSN 0022-3417

Birch, R.J. orcid.org/0000-0003-1579-1397, Burr, N.E., Taylor, J.C. orcid.org/0000-0002-2518-5799 et al. (5 more authors) (2025) Inequalities in colorectal cancer diagnosis by ethnic group: a population-level study in the English National Health Service. BMJ Open Gastroenterology, 12 (1). e001629. ISSN 2054-4774

Taylor, J.C. orcid.org/0000-0002-2518-5799, Burke, D., Iversen, L.H. et al. (6 more authors) (2024) Minimally Invasive Surgery for Colorectal Cancer: Benchmarking Uptake for a Regional Improvement Programme. Clinical Colorectal Cancer, 23 (4). pp. 382-391. ISSN 1533-0028

Williams, C.J.M. orcid.org/0000-0002-1574-653X, Gray, R., Hills, R.K. et al. (22 more authors) (2024) Evaluation of CD3 and CD8 T-Cell Immunohistochemistry for Prognostication and Prediction of Benefit From Adjuvant Chemotherapy in Early-Stage Colorectal Cancer Within the QUASAR Trial. Journal of Clinical Oncology, 42 (29). pp. 3430-3442. ISSN 0732-183X

Srihar, K., Gusnanto, A., Richman, S.D. et al. (16 more authors) (2024) The ATOM-Seq sequence capture panel can accurately predict microsatellite instability status in formalin-fixed tumour samples, alongside routine gene mutation testing. Scientific Reports, 14. 21870. ISSN 2045-2322

Cornish, A.J., Gruber, A.J., Kinnersley, B. et al. (33 more authors) (2024) The genomic landscape of 2,023 colorectal cancers. Nature, 633. pp. 127-136. ISSN 0028-0836

Ummey, O., Leng, J., Canettieri, G. et al. (5 more authors) (2024) Annotation and automated segmentation of single-molecule localisation microscopy data. Journal of Microscopy. ISSN 0022-2720

Domingo, E., Rathee, S., Blake, A. et al. (22 more authors) (2024) Identification and validation of a machine learning model of complete response to radiation in rectal cancer reveals immune infiltrate and TGFβ as key predictors. EBioMedicine, 106. 105228. ISSN 2352-3964

Group, F.C., Glasbey, J., Beggs, A. et al. (430 more authors) (2024) Risk of Bowel Obstruction in Patients Undergoing Neoadjuvant Chemotherapy for High-risk Colon Cancer. Annals of Surgery, 280 (2). pp. 283-293. ISSN 0003-4932

Mahmood, U. orcid.org/0000-0002-2926-3205, Blake, A. orcid.org/0000-0002-8154-6253, Rathee, S. orcid.org/0000-0002-2853-0842 et al. (18 more authors) (2024) Stratification to Neoadjuvant Radiotherapy in Rectal Cancer by Regimen and Transcriptional Signatures. Cancer Research Communications, 4 (7). pp. 1765-1776. ISSN 2767-9764

Hilgers, L., Ghaffari Laleh, N., West, N.P. orcid.org/0000-0002-0346-6709 et al. (13 more authors) (2024) Automated curation of large‐scale cancer histopathology image datasets using deep learning. Histopathology, 84 (7). pp. 1139-1153. ISSN 0309-0167

Gustav, M. orcid.org/0009-0009-3598-5720, Reitsam, N.G. orcid.org/0000-0002-0070-3158, Carrero, Z.I. orcid.org/0000-0001-8501-1566 et al. (15 more authors) (2024) Deep learning for dual detection of microsatellite instability and POLE mutations in colorectal cancer histopathology. npj Precision Oncology, 8. 115. ISSN 2397-768X

Birch, R. orcid.org/0000-0003-1579-1397, Taylor, J., Rahman, T. et al. (6 more authors) (2024) A comparison of frailty measures in population-based data for patients with colorectal cancer. Age and Ageing, 53 (5). afae105. ISSN 0002-0729

Reitsam, N.G. orcid.org/0000-0002-0070-3158, Grosser, B., Enke, J.S. et al. (6 more authors) (2024) Stroma AReactive Invasion Front Areas (SARIFA): a novel histopathologic biomarker in colorectal cancer patients and its association with the luminal tumour proportion. Translational Oncology, 44. 101913. ISSN 1936-5233

Lafarge, M.W. orcid.org/0000-0001-9235-783X, Domingo, E. orcid.org/0000-0003-4390-8767, Sirinukunwattana, K. et al. (17 more authors) (2024) Image-based consensus molecular subtyping in rectal cancer biopsies and response to neoadjuvant chemoradiotherapy. npj Precision Oncology, 8. 89. ISSN 2397-768X

Huber, A.R., Pleguezuelos-Manzano, C., Puschhof, J. et al. (14 more authors) (2024) Improved detection of colibactin-induced mutations by genotoxic E. coli in organoids and colorectal cancer. Cancer Cell, 42 (3). 487-496.E6. ISSN 1535-6108

Rosendahl Huber, A., Pleguezuelos-Manzano, C., Puschhof, J. et al. (14 more authors) (2024) Improved detection of colibactin-induced mutations by genotoxic E. coli in organoids and colorectal cancer. Cancer Cell, 42 (3). 487-496.e6. ISSN 1535-6108

Caley, L.R. orcid.org/0000-0001-8957-1018, Wood, H.M. orcid.org/0000-0003-3009-5904, Bottomley, D. orcid.org/0009-0000-5749-2710 et al. (9 more authors) (2024) The gut microbiota in adults with cystic fibrosis compared to colorectal cancer. Journal of Cystic Fibrosis, 23 (2). pp. 262-268. ISSN 1569-1993

Truhn, D., Arasteh, S.T., Saldanha, O.L. et al. (24 more authors) (2024) Encrypted federated learning for secure decentralized collaboration in cancer image analysis. Medical Image Analysis, 92. 103059. ISSN 1361-8415

West, N. orcid.org/0000-0002-0346-6709, Jiang, X., Hoffmeister, M. et al. (16 more authors) (2024) End-to-end prognostication in colorectal cancer by Deep Learning: a multicentric retrospective study. The Lancet: Digital Health, 6 (1). E33-E43. ISSN 2589-7500

Hartwig, M.F.S. orcid.org/0000-0001-7102-6951, Bulut, M., Ravn-Eriksen, J. et al. (11 more authors) (2023) Combined endoscopic and laparoscopic surgery (CELS) for early colon cancer in high-risk patients. Surgical Endoscopy, 37 (11). pp. 8511-8521. ISSN 0930-2794

Williams, C.J.M. orcid.org/0000-0002-1574-653X, Elliott, F. orcid.org/0000-0002-3239-6914, Sapanara, N. orcid.org/0009-0005-0994-837X et al. (51 more authors) (2023) Associations between AI-assisted tumor amphiregulin and epiregulin IHC and outcomes from anti-EGFR therapy in the routine management of metastatic colorectal cancer. Clinical Cancer Research, 29 (20). pp. 4153-4165. ISSN 1078-0432

Williams, C.J.M. orcid.org/0000-0002-1574-653X, Elliott, F. orcid.org/0000-0002-3239-6914, Sapanara, N. orcid.org/0009-0005-0994-837X et al. (51 more authors) (2023) Associations between AI-Assisted Tumor Amphiregulin and Epiregulin IHC and Outcomes from Anti-EGFR Therapy in the Routine Management of Metastatic Colorectal Cancer. Clinical Cancer Research, 29 (20). pp. 4153-4165. ISSN 1078-0432

Wagner, S.J., Reisenbüchler, D., West, N.P. et al. (46 more authors) (2023) Transformer-based biomarker prediction from colorectal cancer histology: A large-scale multicentric study. Cancer Cell, 41. ISSN 1535-6108

Williams, C.J.M. orcid.org/0000-0002-1574-653X, Seligmann, J.F. orcid.org/0000-0003-4379-6005, Elliott, F. et al. (24 more authors) (2021) Artificial Intelligence–Assisted Amphiregulin and Epiregulin IHC Predicts Panitumumab Benefit in RAS Wild-Type Metastatic Colorectal Cancer. Clinical Cancer Research, 27 (12). pp. 3422-3431. ISSN 1078-0432

Sebag-Montefiore, D. orcid.org/0000-0002-5978-9259, Adams, R., Gollins, S. et al. (17 more authors) (2020) ARISTOTLE: A phase III trial comparing concurrent capecitabine with capecitabine and irinotecan (Ir) chemoradiation as preoperative treatment for MRI-defined locally advanced rectal cancer (LARC). Journal of Clinical Oncology, 38 (15_suppl). 4101. ISSN 0732-183X

Coggins, R.P., Cawkwell, L., Bell, S.M. et al. (4 more authors) (2005) Association between family history and mismatch repair in colorectal cancer. Gut, 54. pp. 636-642. ISSN 0017-5749

Pennica, D., Swanson, T.A., Welsh, J.W. et al. (17 more authors) (1998) WISP genes are members of the connective tissue growth factor family that are up-regulated in Wnt-1-transformed cells and aberrantly expressed in human colon tumors. Proceedings of the National Academy of Sciences, 95 (25). pp. 14717-14722. ISSN 0027-8424

Proceedings Paper

Richman, S. orcid.org/0000-0003-3993-5041, Wood, H. orcid.org/0000-0003-3009-5904, Bottomley, D. et al. (12 more authors) (2024) OP19 Assessment of the efficacy of an extended gene-panel using participants recruited to the Yorkshire Cancer Research Bowel Cancer Improvement Programme. In: Journal of Pathology. Sheffield Pathology 2024, 18-20 Jun 2024, Sheffield, UK. , S10.

Sriha, K., Wood, H., Gusnanto, A. et al. (12 more authors) (2024) P25 Using a small NGS panel to predict microsatellite instability in colorectal cancer samples. In: Journal of Pathology. 6th Joint Winter Meeting with the Royal Society of Medicine, 30-31 Jan 2024, London, UK. Wiley , S13-S14.

Williams, C.J.M., Elliott, F., Shires, M. et al. (58 more authors) (2023) Association between artificial intelligence- (AI) assisted tumour AREG and EREG immunohistochemistry (IHC) and outcomes from anti-EGFR therapy during the routine management of metastatic colorectal cancer (mCRC): an observational cohort study. In: The Journal of Pathology. 5th Joint Meeting with the Royal Society of Medicine, 214th Scientific Meeting of the Pathological Society of Great Britain & Ireland, 23 Jan - 02 Feb 2023, London, UK. Wiley , S16-S16.

Cartlidge, C., Richman, S. orcid.org/0000-0003-3993-5041, Hemmings, G. et al. (5 more authors) (2023) Artificial Intelligence (AI)-Assisted HER2 Immunohistochemistry (IHC) Membranous Scoring in Stage IV Colorectal Cancer (CRC) Tissue Microarrays (TMAs). In: The Journal of Pathology. 14th Joint Meeting of the BDIAP and The Pathological Society, 27-29 Jun 2023, Liverpool, UK. Wiley , S15.

Seligmann, J., Morton, D., Seymour, M. et al. (11 more authors) (2023) 552O FOxTROT: Results of embedded phase II evaluating the addition of panitumumab (pan) to neo-adjuvant FOLFOX for patients (pts) with KRAS-wt colon cancer (CC) with extended biomarker panel. In: Annals of Oncology. ESMO Congress 2023, 2023-10-20 2023-10-24, Madrid, Spain. Elsevier , S412-S412.

Marijnen, C., de Wilt, J., Bach, S. et al. (16 more authors) (2023) OC-0272 Organ preservation in rectal cancer: the randomised STAR-TREC phase II trial. In: Radiotherapy and Oncology. ESTRO 2023, 13-16 May 2023, Vienna, Austria. Elsevier , S207-S208.

Williams, C. orcid.org/0000-0002-1574-653X, Gray, R.G., Shires, M. et al. (17 more authors) (2023) Artificial intelligence-assisted evaluation of tumor infiltrating CD3+ and CD8+ T cells for prognostication and prediction of benefit from adjuvant chemotherapy in early stage colorectal cancer (CRC): A retrospective analysis of the QUASAR trial. In: Journal of Clinical Oncology. 2023 ASCO Gastrointestinal Cancers Symposium, 19-21 Jan 2023, San Francisco, USA. American Society of Clinical Oncology , p. 204.

Williams, C. orcid.org/0000-0002-1574-653X, Elliott, F., Shires, M. et al. (17 more authors) (2023) Association between artificial intelligence (AI) -assisted tumor AREG and EREG immunohistochemistry (IHC) and outcomes from anti-EGFR therapy during the routine management of metastatic colorectal cancer (mCRC): An observational cohort study. In: Journal of Clinical Oncology. 2023 ASCO Gastrointestinal Cancers Symposium, 19-21 Jan 2023, San Francisco, USA. American Society of Clinical Oncology , p. 203.

Hassanieh, S., Domingo, E., Blake, A. et al. (16 more authors) (2022) 337P Prediction of poor response to oxaliplatin by an RNA signature derived and validated in colorectal cancer clinical trials. In: Annals of Oncology. ESMO Congress 2022, 09-13 Sep 2022, Paris, France. Elsevier , S691.

Domingo, E., Rathee, S., Blake, A. et al. (18 more authors) (2021) Abstract LB129: Stratification of radiotherapy and fluoropyrimidine-based chemotherapy from multi-omic profiling in rectal cancer biopsies. In: Cancer Research. AACR Annual Meeting 2021, 17-21 May 2021, Philadelphia, PA, USA. American Association for Cancer Research (AACR) , LB129.

Williams, C. orcid.org/0000-0002-1574-653X, Seligmann, J.F. orcid.org/0000-0003-4379-6005, Guetter, C. et al. (13 more authors) (2021) Artificial intelligence-assisted immunohistochemical (IHC) evaluation of tumor amphiregulin (AREG) and epiregulin (EREG) expression as a combined predictive biomarker for panitumumab (Pan) therapy benefit in RAS wild-type (wt) metastatic colorectal cancer (mCRC): Analysis within the phase III PICCOLO trial. In: Journal of Clinical Oncology. 2021 Gastrointestinal Cancers Symposium, 15-17 Jan 2021, Online. American Society of Clinical Oncology , p. 111.

Marks, K.M., Hall, H., Wu, X. et al. (3 more authors) Exposure to enterotoxigenic bacteroides fragilis (ETBF) bacteria found in association with colorectal cancer increases clonal mutations in mice. In: The Journal of Pathology. Winter Meeting: Unleashing the edge power of pathology, 31 Jan - 02 Feb 2023, London, UK. , S7-S7.

This list was generated on Wed Apr 2 22:23:07 2025 BST.