Items where authors include "Ezer, Daphne"

Article

Redmond, Ethan, Ronald, James orcid.org/0000-0002-8847-0378, Davis, Seth Jon orcid.org/0000-0001-5928-9046 et al. (1 more author) (2025) Stable and dynamic gene expression patterns over diurnal and developmental timescales in Arabidopsis thaliana. New Phytologist. ISSN 1469-8137 (In Press)

Ezer, Daphne, Tavakoli, Shahin and Conde, Susana Maria (2024) Functional regression clustering with multiple functional gene expressions. PLoS ONE. e0310991. ISSN 1932-6203

Eljounaidi, Kaouthar orcid.org/0000-0003-4675-226X, Radzikowska, Barbara A, Whitehead, Caragh B et al. (10 more authors) (2024) Variation of terpene alkaloids in Daphniphyllum macropodum across plants and tissues. The New phytologist. pp. 299-313. ISSN 1469-8137

Yuan, Li, Avello Fernández, Paula, Zhu, Zihao et al. (11 more authors) (2023) Complex epistatic interactions between ELF3, PRR9, and PRR7 regulates the circadian clock and plant physiology. Genetics. iyad217. ISSN 0016-6731

Balcerowicz, Martin, Mahjoub, Mahair, Nguyen, Duy et al. (6 more authors) (2021) An early-morning gene network controlled by phytochromes and cryptochromes regulates photomorphogenesis pathways in Arabidopsis. Molecular plant. pp. 983-996. ISSN 1674-2052

Paige, Brooks, Bell, James, Bellet, Aurelien et al. (2 more authors) (2021) Reconstructing Genotypes in Private Genomic Databases from Genetic Risk Scores. Journal of Computational Biology. pp. 435-451. ISSN 1066-5277

Autran, Daphne, Bassel, George W., Chae, Eunyoung et al. (18 more authors) (2021) What is quantitative plant biology? Quantitative Plant Biology. e10. ISSN 2632-8828

Tomašev, Nenad, Cornebise, Julien, Hutter, Frank et al. (22 more authors) (2020) AI for social good: unlocking the opportunity for positive impact. Nature Communications. 2468 (2020). ISSN 2041-1723

Tong, Meixuezi, Lee, Kyounghee, Ezer, Daphne et al. (9 more authors) (2020) The Evening Complex establishes repressive chromatin domains via H2A.Z deposition. Plant Physiology. pp. 612-625. ISSN 0032-0889

Ezer, Daphne and Keir, Joseph (2019) NITPicker: selecting time points for follow-up experiments. BMC Bioinformatics. 166 (2019). ISSN 1471-2105

Brestovitsky, Anna and Ezer, Daphne (2019) A mass participatory experiment provides a rich temporal profile of temperature response in spring onions. Plant Direct. ISSN 2475-4455

Ezer, Daphne and Whitaker, Kirstie (2019) Point of View: Data science for the scientific life cycle. eLife. e43979. ISSN 2050-084X

Ma, Xiaoyan, Ezer, Daphne, Adryan, Boris et al. (1 more author) (2018) Canonical and single-cell Hi-C reveal distinct chromatin interaction sub-networks of mammalian transcription factors. Genome biology. 174 (2018). ISSN 1474-760X

Ezer, Daphne, Moignard, Victoria, Göttgens, Berthold et al. (1 more author) (2016) Determining Physical Mechanisms of Gene Expression Regulation from Single Cell Gene Expression Data. PLoS Computational Biology. ISSN 1553-7358

Monograph

Mahjoub, Mahair and Ezer, Daphne (2020) PAFway: pairwise associations between functional annotations in biological networks and pathways. Working Paper.

Proceedings Paper

Paige, Brooks, Bell, James, Bellet, Aurelien et al. (2 more authors) (2020) Reconstructing Genotypes in Private Genomic Databases from Genetic Risk Scores. In: Schwartz, Russell, (ed.) Lecture Notes in Computer Science:Research in Computational Molecular Biology: 24th Annual International Conference, RECOMB 2020, Padua, Italy, May 10–13, 2020, Proceedings. UNSPECIFIED. Lecture Notes in Bioinformatics (LNBI) . Springer Nature Switzerland , pp. 266-268.