Items where authors include "Craggs, T.D."

Article

Agam, G. orcid.org/0000-0003-1623-4920, Gebhardt, C. orcid.org/0000-0002-5834-6579, Popara, M. orcid.org/0000-0003-2626-6096 et al. (44 more authors) (2023) Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins. Nature Methods, 20. pp. 523-535. ISSN 1548-7091

Bennison, D.J. orcid.org/0000-0001-9026-9262, Nakamoto, J.A., Craggs, T.D. et al. (3 more authors) (2021) The stringent response inhibits 70S ribosome formation in Staphylococcus aureus by impeding GTPase-ribosome interactions. mBio, 12 (6). e02679-21.

Jeffet, J., Ionescu, A., Michaeli, Y. et al. (4 more authors) (2021) Multimodal single-molecule microscopy with continuously controlled spectral resolution. Biophysical Reports, 1 (1). 100013. ISSN 2667-0747

Shaw, R.A., Johnston-Wood, T., Ambrose, B. et al. (2 more authors) (2020) CHARMM-DYES : Parameterization of fluorescent dyes for use with the CHARMM force field. Journal of Chemical Theory and Computation, 16 (12). pp. 7817-7824. ISSN 1549-9618

Ambrose, B., Baxter, J.M., Cully, J. et al. (8 more authors) (2020) The smfBox is an open-source platform for single-molecule FRET. Nature Communications, 11 (1). 5641.

Lerner, E., Ambrose, B., Barth, A. et al. (23 more authors) (2020) The FRET-based structural dynamics challenge -- community contributions to consistent and open science practices. arXiv. (Submitted)

Abdu, K., Aiertza, M.K., Wilkinson, O.J. et al. (5 more authors) (2020) Synthesis of oligodeoxyribonucleotides containing a tricyclic thio analogue of O6-methylguanine and their recognition by MGMT and Atl1. Nucleosides, Nucleotides & Nucleic Acids, 39 (8). pp. 1108-1121. ISSN 1525-7770

Craggs, T.D. orcid.org/0000-0002-7121-0609, Sustarsic, M., Plochowietz, A. et al. (8 more authors) (2019) Substrate conformational dynamics facilitate structure-specific recognition of gapped DNA by DNA polymerase. Nucleic Acids Research, 47 (20). pp. 10788-10800. ISSN 0305-1048

Hellenkamp, B., Schmid, S., Doroshenko, O. et al. (50 more authors) (2018) Precision and accuracy of single-molecule FRET measurements - a multi-laboratory benchmark study. Nature Methods, 15. pp. 669-676. ISSN 1548-7091

Bennet, I., Finger, L.D. orcid.org/0000-0002-2342-9569, Baxter, N.J. et al. (8 more authors) (2018) Regional Conformational Flexibility Couples Substrate Specificity and Scissile Phosphate Diester Selectivity in Human Flap Endonuclease 1. Nucleic Acids Research, 46 (11). pp. 5618-5633. ISSN 0305-1048

Fisher, G.L.M., Pastrana, C.L., Higman, V.A. et al. (9 more authors) (2017) The C-terminal domain Of ParB Is critical for dynamic DNA binding and bridging interactions which condense the bacterial centromere. eLife, 6. e28086.

Meli, M., Sustarsic, M., Craggs, T.D. et al. (2 more authors) (2016) DNA Polymerase Conformational Dynamics and the Role of Fidelity-Conferring Residues: Insights from Computational Simulations. Frontiers in Molecular Biosciences, 3.

Algasaier, S.I., Exell, J.C., Bennet, I.A. et al. (6 more authors) (2016) DNA and Protein Requirements for Substrate Conformational Changes Necessary for Human Flap Endonuclease-1 Catalyzed Reaction. The Journal of Biological Chemistry, 291 (15). pp. 8258-8268. ISSN 0021-9258

Craggs, T.D., Hutton, R.D., Brenlla, A. et al. (2 more authors) (2014) Single-molecule characterization of Fen1 and Fen1/PCNA complexes acting on flap substrates. Nucleic Acids Research, 42 (3). pp. 1857-1872. ISSN 0305-1048

Hohlbein, J., Aigrain, L., Craggs, T.D. et al. (6 more authors) (2013) Conformational landscapes of DNA polymerase I and mutator derivatives establish fidelity checkpoints for nucleotide insertion. Nature Communications, 4. 2131. ISSN 2041-1723

Hutton, R.D., Craggs, T.D., White, M.F. et al. (1 more author) (2010) PCNA and XPF cooperate to distort DNA substrates. Nucleic Acids Research, 38 (5). pp. 1664-1675. ISSN 0305-1048