Shimizu, S orcid.org/0000-0002-7853-1683 (2004) Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments. Proceedings of the National Academy of Sciences of the United States of America. pp. 1195-1199. ISSN 1091-6490
Abstract
How do we estimate, from thermodynamic measurements, the number of water molecules adsorbed or released from biomolecules as a result of a biochemical process such as binding and allosteric effects? Volumetric and osmotic stress analyses are established methods for estimating water numbers; however, these techniques often yield conflicting results. In contrast, Kirkwood-Buff theory offers a novel way to calculate excess hydration number from volumetric data, provides a quantitative condition to gauge the accuracy of osmotic stress analysis, and clarifies the relationship between osmotic and volumetric analyses. I have applied Kirkwood-Buff theory to calculate water numbers for two processes: (i) the allosteric transition of hemoglobin and (h) the binding of camphor to cytochrome P450. I show that osmotic stress analysis may overestimate hydration number changes for these processes.
Metadata
Item Type: | Article |
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Authors/Creators: |
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Copyright, Publisher and Additional Information: | © 2004 by The National Academy of Sciences of the USA |
Keywords: | water,partial molar volume,preferential interaction,hemoglobin,cytochrome P450,PARTIAL MOLAR VOLUME,PROTEIN HYDRATION,HYDROPHOBIC SOLUTES,BINDING,WATER,HEMOGLOBIN,THERMODYNAMICS,SOLVATION,SOLVENT,COMPRESSIBILITY |
Dates: |
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Institution: | The University of York |
Academic Units: | The University of York > Faculty of Sciences (York) > Chemistry (York) |
Depositing User: | Repository Officer |
Date Deposited: | 01 Jul 2005 |
Last Modified: | 16 Oct 2024 11:53 |
Published Version: | https://doi.org/10.1073/pnas.0305836101 |
Status: | Published |
Refereed: | Yes |
Identification Number: | 10.1073/pnas.0305836101 |
Related URLs: | |
Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:543 |