Ruddle, R.A., Hama, L. orcid.org/0000-0003-1912-4890, Wochner, P. et al. (1 more author) (2024) SetVis: Visualizing Large Numbers of Sets and Intersections. The Journal of Open Source Software, 9 (103). 6925. ISSN 2475-9066
Abstract
Set-type data occurs in many domains such as life sciences (Lamy & Tsopra, 2019), health (Landolfi et al., 2022) and the retail industry (Adnan & Ruddle, 2018), as well as in generic applications such as analysing structures of missing data (Ruddle, Adnan, & Hall, 2022) and association rule mining (Wang et al., 2020). SetVis is new matrix-based set visualization software, implemented as a Python package which is available from PyPi. The documentation is available from setvis.readthedocs.io which contains various hands-on Jupyter notebooks guiding users to use the package. SetVis uses a memory-efficient design, operates with datasets held in RAM or a database such as PostgreSQL, and allows user interaction graphically or programmatically. A technical evaluation shows that SetVis uses orders of magnitude less memory than the UpSet (Lex et al., 2014) Python package (Nothman, 2022).
Metadata
Item Type: | Article |
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Authors/Creators: |
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Copyright, Publisher and Additional Information: | Authors of JOSS papers retain copyright. This work is licensed under a Creative Commons Attribution 4.0 International License. |
Dates: |
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Institution: | The University of Leeds |
Academic Units: | The University of Leeds > Faculty of Engineering & Physical Sciences (Leeds) > School of Computing (Leeds) |
Funding Information: | Funder Grant number Alan Turing Institute Not Known EPSRC (Engineering and Physical Sciences Research Council) EP/N013980/1 |
Depositing User: | Symplectic Publications |
Date Deposited: | 24 Apr 2025 09:34 |
Last Modified: | 24 Apr 2025 09:34 |
Published Version: | https://joss.theoj.org/papers/10.21105/joss.06925 |
Status: | Published |
Publisher: | Open Journals |
Identification Number: | 10.21105/joss.06925 |
Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:225690 |
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