Milne, Jamie, Qian, Chen, Hargreaves, David et al. (2 more authors) (2023) Not getting in too deep:A practical deep learning approach to routine crystallisation image classification. PLoS ONE. 0282562. ISSN 1932-6203
Abstract
Using a relatively small training set of ~16 thousand images from macrmolecular crystallisation experiments, we compare classification results obtained with four of the most widely- used convolutional deep-learning network architectures that can be implemented without the need for extensive computational resources. We show that the classifiers have different strengths that can be combined to provide an ensemble classifier achieving a classification accuracy comparable to that obtained by a large consortium initiative. We use eight classes to effectively rank the experimental outcomes, thereby providing detailed information that can be used with routine crystallography experiments to automatically identify crystal forma- tion for drug discovery and pave the way for further exploration of the relationship between crystal formation and crystallisation conditions.
Metadata
Item Type: | Article |
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Authors/Creators: |
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Copyright, Publisher and Additional Information: | © 2023 Milne et al. |
Dates: |
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Institution: | The University of York |
Academic Units: | The University of York > Faculty of Sciences (York) > Mathematics (York) |
Depositing User: | Pure (York) |
Date Deposited: | 23 Mar 2023 15:30 |
Last Modified: | 24 Dec 2024 00:14 |
Published Version: | https://doi.org/10.1371/journal.pone.0282562 |
Status: | Published |
Refereed: | Yes |
Identification Number: | 10.1371/journal.pone.0282562 |
Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:197679 |
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Filename: journal.pone.0282562.pdf
Description: Not getting in too deep: A practical deep learning approach to routine crystallisation image classification
Licence: CC-BY 2.5