Duncan, EJ orcid.org/0000-0002-1841-504X, Leask, MP and Dearden, PK (2020) Genome Architecture Facilitates Phenotypic Plasticity in the Honeybee (Apis mellifera). Molecular Biology and Evolution, 37 (7). pp. 1964-1978. ISSN 0737-4038
Abstract
Phenotypic plasticity, the ability of an organism to alter its phenotype in response to an environmental cue, facilitates rapid adaptation to changing environments. Plastic changes in morphology and behaviour are underpinned by widespread gene expression changes. However, it is unknown if, or how, genomes are structured to ensure these robust responses. Here we use repression of honeybee worker ovaries as a model of plasticity. We show that the honeybee genome is structured with respect to plasticity; genes that respond to an environmental trigger are co-located in the honeybee genome in a series of gene clusters, many of which have been assembled in the last 80 million years during the evolution of the Apidae. These clusters are marked by histone modifications that prefigure the gene expression changes that occur as the ovary activates, suggesting that these genomic regions are poised to respond plastically. That the linear sequence of the honeybee genome is organised to coordinate wide-spread gene expression changes in response to environmental influences and that the chromatin organisation in these regions is prefigured to respond to these influences is perhaps unexpected and has implications for other examples of plasticity in physiology, evolution and human disease.
Metadata
Item Type: | Article |
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Authors/Creators: |
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Copyright, Publisher and Additional Information: | © The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
Keywords: | Phenotypic plasticity, reproductive constraint, ChIP-seq, H3K27me3, genomic regulatory domain, gene cluster, RNA-seq, polycomb, honeybee, evolution of gene expression, Apis mellifera |
Dates: |
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Institution: | The University of Leeds |
Academic Units: | The University of Leeds > Faculty of Biological Sciences (Leeds) > School of Biology (Leeds) |
Funding Information: | Funder Grant number EU - European Union 752656 |
Depositing User: | Symplectic Publications |
Date Deposited: | 27 Feb 2020 11:30 |
Last Modified: | 02 Apr 2022 15:07 |
Status: | Published |
Publisher: | Oxford University Press |
Identification Number: | 10.1093/molbev/msaa057 |
Open Archives Initiative ID (OAI ID): | oai:eprints.whiterose.ac.uk:157742 |