Reconstruction of Microbial Haplotypes by Integration of Statistical and Physical Linkage in Scaffolding

Cao, Chen, He, Jingni, Mak, Lauren et al. (12 more authors) (2021) Reconstruction of Microbial Haplotypes by Integration of Statistical and Physical Linkage in Scaffolding. Molecular Biology and Evolution. pp. 2660-2672. ISSN 0737-4038

Abstract

Metadata

Authors/Creators:
  • Cao, Chen
  • He, Jingni
  • Mak, Lauren
  • Perera, Deshan
  • Kwok, Devin
  • Wang, Jia
  • Li, Minghao
  • Mourier, Tobias
  • Gavriliuc, Stefan
  • Greenberg, Matthew
  • Morrissy, A. Sorana
  • Sycuro, Laura K.
  • Yang, Guang
  • Jeffares, Daniel C. ORCID logo https://orcid.org/0000-0001-7320-0706
  • Long, Quan
Copyright, Publisher and Additional Information: Publisher Copyright: © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.
Keywords: haplotype reconstruction,linkage disequilibrium,regularization,within-host evolution,Ecology, Evolution, Behavior and Systematics,Molecular Biology,Genetics
Dates:
  • Published (online): 6 February 2021
  • Published: 19 May 2021
Institution: The University of York
Academic Units: The University of York > Faculty of Sciences (York) > Biology (York)
The University of York > Faculty of Sciences (York) > Centre for Immunology and Infection (CII) (York)
Depositing User: Pure (York)
Date Deposited: 12 Mar 2021 16:30
Last Modified: 28 Apr 2022 00:03
Published Version: https://doi.org/10.1093/molbev/msab037
Status: Published
Refereed: Yes
Identification Number: https://doi.org/10.1093/molbev/msab037
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Description: Reconstruction of Microbial Haplotypes by Integration of Statistical and Physical Linkage in Scaffolding

Licence: CC-BY 2.5

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