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Osteocalcin protein sequences of Neanderthals and modern primates

Nielsen-Marsh, C M, Richards, M P, Hauschka, P V, Thomas-Oates, J E, Trinkaus, E, Pettitt, P B, Karavanic, I, Poinar, H and Collins, Matthew James (2005) Osteocalcin protein sequences of Neanderthals and modern primates. Proceedings of the National Academy of Sciences, USA. pp. 4409-4413. ISSN 0027-8424

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Abstract

We report here protein sequences of fossil hominids, from two Neanderthals dating to approximate to 75,000 years old from Shanidar Cave in Iraq. These sequences, the oldest reported fossil primate protein sequences, are of bone osteocalcin, which was extracted and sequenced by using MALDI-TOF/TOF mass spectrometry. Through a combination of direct sequencing and peptide mass mapping, we determined that Neanderthals have an osteocalcin amino acid sequence that is identical to that of modern humans. We also report complete osteocalcin sequences for chimpanzee (Pan troglodytes) and gorilla (Gorilla gorilla gorilla) and a partial sequence for orangutan (Pongo pygmaeus), all of which are previously unreported. We found that the osteocalcin sequences of Neanderthals, modern human, chimpanzee, and orangutan are unusual among mammals in that the ninth amino acid is proline (Pro-9), whereas most species have hydroxyproline (Hyp-9). Posttranslational hydroxylation of Pro-9 in osteocalcin by prolyl-4-hydroxylase requires adequate concentrations of vitamin C (L-ascorbic acid), molecular O-2, Fe2+, and 2-oxoglutarate, and also depends on enzyme recognition of the target proline substrate consensus sequence Leu-Gly-Ala-Pro-9-Ala-Pro-Tyr occurring in most mammals. in five species with Pro-9-Val-10, hydroxylation is blocked, whereas in gorilla there is a mixture of Pro-9 and Hyp-9. We suggest that the absence of hydroxylation of Pro-9 in Pan, Pongo, and Homo may reflect response to a selective pressure related to a decline in vitamin C in the diet during omnivorous dietary adaptation, either independently or through the common ancestor of these species.

Item Type: Article
Copyright, Publisher and Additional Information: Copyright © 2005 by the National Academy of Sciences. Published online before print March 7, 2005, 10.1073/pnas.0500450102
Keywords: MALDI-TOF/TOF, dietary adaptation, biomolecular preservation, vitamin C, evolution, GLA PROTEIN, BONE, COLLAGEN, HIF, RECOGNITION, COMPLEX, MODIFY, FAMILY, MOUSE, RAT
Institution: The University of York
Academic Units: The University of York > Chemistry (York)
The University of York > Archaeology (York)
Depositing User: Matthew J. Collins
Date Deposited: 25 Aug 2005
Last Modified: 16 Oct 2014 15:25
Published Version: http://dx.doi.org/10.1073/pnas.0500450102
Status: Published
Refereed: Yes
Related URLs:
URI: http://eprints.whiterose.ac.uk/id/eprint/570

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