Alevin efficiently estimates accurate gene abundances from dscRNA-seq data.

Srivastava, A., Malik, L., Smith, T. et al. (2 more authors) (2019) Alevin efficiently estimates accurate gene abundances from dscRNA-seq data. Genome Biology , 20. 65. ISSN 1474-760X

Abstract

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Copyright, Publisher and Additional Information: © 2019 The Author(s). This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
Keywords: Single-cell RNA-seq; UMI deduplication; Quantification; Cellular barcode
Dates:
  • Accepted: 5 March 2019
  • Published: 27 March 2019
Institution: The University of Sheffield
Academic Units: The University of Sheffield > Faculty of Science (Sheffield) > School of Biological Sciences (Sheffield) > Department of Molecular Biology and Biotechnology (Sheffield)
Depositing User: Symplectic Sheffield
Date Deposited: 01 Apr 2019 09:22
Last Modified: 01 Apr 2019 09:22
Status: Published
Publisher: BMC (part of Springer Nature)
Refereed: Yes
Identification Number: https://doi.org/10.1186/s13059-019-1670-y
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