Items where authors include "Stockley, PG"

Article

Sandle, GI, Herod, MR orcid.org/0000-0002-8626-6787, Fontana, J orcid.org/0000-0002-9084-2927 et al. (2 more authors) (2023) Is intestinal transport dysfunctional in COVID-19-related diarrhea? American Journal of Physiology-Gastrointestinal and Liver Physiology, 324 (5). G415-G418. ISSN 0193-1857

Burke, MJ, Scott, JNF, Minshull, TC et al. (6 more authors) (2022) A bovine antibody possessing an ultralong complementarity-determining region CDRH3 targets a highly conserved epitope in sarbecovirus spike proteins. Journal of Biological Chemistry, 298 (12). 102624. ISSN 0021-9258

Chandler-Bostock, R orcid.org/0000-0002-1225-4601, Bingham, RJ, Clark, S et al. (10 more authors) (2022) Genome-regulated Assembly of a ssRNA Virus May Also Prepare It for Infection. Journal of Molecular Biology, 434 (20). 167797. 167797-. ISSN 0022-2836

Abulwerdi, F, Fatehi, F, Manfield, I orcid.org/0000-0003-3765-0325 et al. (5 more authors) (2022) Dataset Of High-Throughput Ligand Screening Against the RNA Packaging Signals Regulating Hepatitis B Virus Nucleocapsid Formation. Data in Brief, 42. 108206. p. 108206. ISSN 2352-3409

Patel, N orcid.org/0000-0001-6098-3633, Abulwerdi, F, Fatehi, F et al. (5 more authors) (2022) Dysregulation of Hepatitis B Virus Nucleocapsid Assembly in vitro by RNA-binding Small Ligands. Journal of Molecular Biology, 434 (10). 167557. ISSN 0022-2836

Fatehi, F, Bingham, RJ, Stockley, PG orcid.org/0000-0002-1360-2751 et al. (1 more author) (2022) An age-structured model of hepatitis B viral infection highlights the potential of different therapeutic strategies. Scientific Reports, 12 (1). 1252. ISSN 2045-2322

Patel, N orcid.org/0000-0001-6098-3633, Clark, S, Weiß, EU et al. (7 more authors) (2021) In vitro functional analysis of gRNA sites regulating assembly of hepatitis B virus. Communications Biology, 4. 1407. ISSN 2399-3642

Fatehi, F, Bingham, RJ, Dechant, P-P et al. (2 more authors) (2021) Therapeutic interfering particles exploiting viral replication and assembly mechanisms show promising performance: a modelling study. Scientific Reports, 11. 23847. ISSN 2045-2322

Fatehi, F, Bingham, RJ, Dykeman, EC et al. (2 more authors) (2021) Comparing antiviral strategies against COVID-19 via multiscale within-host modelling. Royal Society Open Science, 8 (8). 210082. ISSN 2054-5703

Tetter, S, Terasaka, N, Steinauer, A et al. (10 more authors) (2021) Evolution of a virus-like architecture and packaging mechanism in a repurposed bacterial protein. Science, 372 (6547). pp. 1220-1224. ISSN 0036-8075

Thangsunan, P, Lal, N, Tiede, C et al. (8 more authors) (2021) Affimer-based impedimetric biosensors for fibroblast growth factor receptor 3 (FGFR3): a novel tool for detection and surveillance of recurrent bladder cancer. Sensors and Actuators B: Chemical, 326. 128829. ISSN 0925-4005

Fatehi, F, Bingham, RJ, Dykeman, EC et al. (3 more authors) (2021) An Intracellular Model of Hepatitis B Viral Infection: An In Silico Platform for Comparing Therapeutic Strategies. Viruses, 13 (1). 11. ISSN 1999-4915

Chandler-Bostock, R orcid.org/0000-0002-1225-4601, Mata, CP, Bingham, RJ et al. (7 more authors) (2020) Assembly of infectious enteroviruses depends on multiple, conserved genomic RNA-coat protein contacts. PLoS Pathogens, 16 (12). e1009146. ISSN 1553-7366

Burke, MJ orcid.org/0000-0002-7859-3518, Stockley, PG orcid.org/0000-0002-1360-2751 and Boyes, J orcid.org/0000-0002-8705-9827 (2020) Broadly Neutralizing Bovine Antibodies: Highly Effective New Tools against Evasive Pathogens? Viruses, 12 (4). 473. ISSN 1999-4915

Kirkham, CM, Scott, JNF, Wang, X et al. (7 more authors) (2019) Cut-and-Run: A Distinct Mechanism by which V(D)J Recombination Causes Genome Instability. Molecular Cell, 74 (3). 584-597.e9. ISSN 1097-2765

Twarock, R and Stockley, PG orcid.org/0000-0002-1360-2751 (2019) RNA-Mediated Virus Assembly: Mechanisms and Consequences for Viral Evolution and Therapy. Annual Review of Biophysics, 48 (1). pp. 495-514. ISSN 1936-122X

Twarock, R, Bingham, RJ, Dykeman, EC et al. (1 more author) (2018) A modelling paradigm for RNA virus assembly. Current Opinion in Virology, 31. pp. 74-81. ISSN 1879-6257

Twarock, R, Leonov, G and Stockley, PG orcid.org/0000-0002-1360-2751 (2018) Hamiltonian path analysis of viral genomes. Nature Communications, 9. 2021. ISSN 2041-1723

Patel, N orcid.org/0000-0001-6098-3633, Wroblewski, E, Leonov, G et al. (4 more authors) (2017) Rewriting Nature’s Assembly Manual for a ssRNA Virus. Proceedings of the National Academy of Sciences of the United States of America, 114 (46). pp. 12255-12260. ISSN 0027-8424

Patel, N orcid.org/0000-0001-6098-3633, White, SJ orcid.org/0000-0002-9227-9461, Thompson, RF et al. (9 more authors) (2017) HBV RNA pre-genome encodes specific motifs that mediate interactions with the viral core protein that promote nucleocapsid assembly. Nature Microbiology, 2 (8). 17098. ISSN 2058-5276

Shakeel, S, Dykeman, EC, White, SJ orcid.org/0000-0002-9227-9461 et al. (5 more authors) (2017) Genomic RNA folding mediates assembly of human parechovirus. Nature Communications, 8. 5. ISSN 2041-1723

Borodavka, A, Singaram, SW, Stockley, PG orcid.org/0000-0002-1360-2751 et al. (3 more authors) (2016) Sizes of Long RNA Molecules Are Determined by the Branching Patterns of Their Secondary Structures. Biophysical Journal, 111 (10). pp. 2077-2085. ISSN 0006-3495

Stewart, H, Bingham, RJ, White, SJ et al. (6 more authors) (2016) Identification of novel RNA secondary structures within the hepatitis C virus genome reveals a cooperative involvement in genome packaging. Scientific Reports, 6. 22952. ISSN 2045-2322

Stockley, PG orcid.org/0000-0002-1360-2751, White, SJ, Dykeman, E et al. (11 more authors) (2016) Bacteriophage MS2 genomic RNA encodes an assembly instruction manual for its capsid. Bacteriophage, 6 (1). ISSN 2159-7073

Rolfsson, O, Middleton, S, Manfield, IW et al. (9 more authors) (2016) Direct Evidence for Packaging Signal-mediated Assembly of Bacteriophage MS2. Journal of Molecular Biology, 428 (2). pp. 431-448. ISSN 0022-2836

Fisher, M, Williamson, DJ, Burslem, GM et al. (11 more authors) (2015) Trivalent Gd-DOTA reagents for modification of proteins. RSC Advances, 5 (116). 96194 - 96200. ISSN 2046-2069

Borodavka, A, Ault, J, Stockley, PG et al. (1 more author) (2015) Evidence that avian reovirus σNS is an RNA chaperone: implications for genome segment assortment. Nucleic acids research. ISSN 0305-1048

Geraets, JA, Dykeman, EC, Stockley, PG et al. (2 more authors) (2015) Asymmetric Genome Organization in an RNA Virus Revealed via Graph-Theoretical Analysis of Tomographic Data. PLoS Computational Biology, 11 (3). e1004146 - ?. ISSN 1553-734X

White, SJ orcid.org/0000-0002-9227-9461, Johnson, SD, Sellick, MA et al. (3 more authors) (2015) The Influence of Two‐Dimensional Organization on Peptide Conformation. Angewandte Chemie International Edition, 54 (3). pp. 974-978. ISSN 0044-8249

Sarell, CJ, Karamanos, TK, White, SJ et al. (6 more authors) (2014) Distinguishing closely related amyloid precursors using an RNA aptamer. The Journal of Biological Chemistry, 289 (39). 26859 - 26871. ISSN 0021-9258

Yan, R, Hallam, A, Stockley, PG et al. (1 more author) (2014) Oncogene dependency and the potential of targeted RNAi-based anti-cancer therapy. Biochemical Journal, 461 (1). 1 - 13. ISSN 0264-6021

Bakker, SE, Groppelli, E, Pearson, AR et al. (3 more authors) (2014) Limits of structural plasticity in a picornavirus capsid revealed by a massively expanded equine rhinitis A virus particle. Journal of Virology, 88 (11). 6093 - 6099. ISSN 0022-538X

Sharma, A, Leach, RN, Gell, C et al. (9 more authors) (2014) Domain movements of the enhancer-dependent sigma factor drive DNA delivery into the RNA polymerase active site: insights from single molecule studies. Nucleic Acids Research, 42 (8). 5177 - 5190. ISSN 0305-1048

Sarell, CJ, Stockley, PG and Radford, SE (2013) Assessing the causes and consequences of co-polymerization in amyloid formation. Prion, 7 (5). 359 - 368. ISSN 1933-6896

Borodavka, A, Tuma, R orcid.org/0000-0003-0047-0013 and Stockley, PG orcid.org/0000-0002-1360-2751 (2013) A two-stage mechanism of viral RNA compaction revealed by single molecule fluorescence. RNA Biology, 10 (4). pp. 481-489. ISSN 1547-6286

Stockley, PG orcid.org/0000-0002-1360-2751, Twarock, R, Bakker, SE et al. (8 more authors) (2013) Packaging signals in single-stranded RNA viruses: nature’s alternative to a purely electrostatic assembly mechanism. Journal of Biological Physics, 39 (2). pp. 277-287. ISSN 0092-0606

Wnęk, M, Górzny, ML, Ward, MB et al. (5 more authors) (2013) Fabrication and characterization of gold nano-wires templated on virus-like arrays of tobacco mosaic virus coat proteins. Nanotechnology, 24 (2). 025605. ISSN 0957-4484

Derbyshire, N, White, SJ, Bunka, DH et al. (6 more authors) (2012) Toggled RNA Aptamers Against Aminoglycosides Allowing Facile Detection of Antibiotics Using Gold Nanoparticle Assays. Analytical Chemistry, 84 (15). 6595 - 6602 (8).

Joce, C, Caryl, JA, Stockley, PG et al. (2 more authors) (2009) Identification of stable S-adenosylmethionine (SAM) analogues derivatised with bioorthogonal tags: effect of ligands on the affinity of the E. coli methionine repressor, MetJ, for its operator DNA. Organic & Biomolecular Chemistry, 7 (4). 635 - 638. ISSN 1477-0520