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Halliwell, J., Baker, D., Judge, K. et al. (6 more authors) (2021) Nanopore sequencing indicates that tandem amplification of chromosome 20q11.21 in human pluripotent stem cells is driven by break induced replication. Stem Cells and Development, 30 (11). pp. 578-586. ISSN 1547-3287

Wind, M., Gogolou, A. orcid.org/0000-0002-3581-2426, Manipur, I. et al. (8 more authors) (2021) Defining the signalling determinants of a posterior ventral spinal cord identity in human neuromesodermal progenitor derivatives. Development, 148 (6). dev194415. ISSN 0950-1991

Andrews, P.W. orcid.org/0000-0001-7215-4410 (2021) Human pluripotent stem cells : genetic instability or stability? Regenerative Medicine, 16 (2). pp. 113-115.

Halliwell, J., Barbaric, I. and Andrews, P.W. orcid.org/0000-0001-7215-4410 (2020) Acquired genetic changes in human pluripotent stem cells : origins and consequences. Nature Reviews Molecular Cell Biology, 21 (12). pp. 715-728. ISSN 1471-0072

Thompson, O., von Meyenn, F., Hewitt, Z. orcid.org/0000-0001-7519-7029 et al. (14 more authors) (2020) Low rates of mutation in clinical grade human pluripotent stem cells under different culture conditions. Nature Communications, 11 (1). 1528.

Stavish, D., Böiers, C., Price, C. et al. (10 more authors) (2020) Generation and trapping of a mesoderm biased state of human pluripotency. Nature Communications, 11. 4989.

Frith, T.J.R., Gogolou, A., Hackland, J.O.S. et al. (8 more authors) (2020) Retinoic acid accelerates the specification of enteric neural progenitors from in-vitro-derived neural crest. Stem Cell Reports, 15 (3). pp. 557-565. ISSN 2213-6711

Hoff, A.M., Kraggerud, S.M., Alagaratnam, S. et al. (8 more authors) (2020) Frequent copy number gains of SLC2A3 and ETV1 in testicular embryonal carcinomas. Endocrine-Related Cancer, 27 (9). pp. 457-468. ISSN 1351-0088

Halliwell, J.A., Frith, T.J.R., Laing, O. et al. (8 more authors) (2020) Nucleosides rescue replication-mediated genome instability of human pluripotent stem cells. Stem Cell Reports, 14 (6). pp. 1009-1017. ISSN 2213-6711

Halliwell, J.A., Frith, T.J.R. orcid.org/0000-0002-6078-5466, Laing, O. et al. (8 more authors) (2019) Nucleosides rescue replication-mediated genome instability of human pluripotent stem cells. bioRxiv. (Submitted)

Zhang, J., Hirst, A.J., Duan, F. et al. (13 more authors) (2019) Anti-apoptotic mutations desensitize human pluripotent stem cells to mitotic stress and enable aneuploid cell survival. Stem Cell Reports, 12 (3). pp. 557-571. ISSN 2213-6711

Stacey, G., Andrews, P.W. orcid.org/0000-0001-7215-4410, Asante, C. et al. (41 more authors) (2018) Science-based assessment of source materials for cell-based medicines: report of a stakeholders workshop. Regenerative Medicine, 13 (8). pp. 935-944. ISSN 1746-0751

Frith, T.J.R. orcid.org/0000-0002-6078-5466, Granata, I., Wind, M. et al. (16 more authors) (2018) Human axial progenitors generate trunk neural crest cells in vitro. eLife, 7. e35786. ISSN 2050-084X

Allison, T.F., Smith, A.J.H., Anastassiadis, K. et al. (12 more authors) (2018) Identification and single-cell functional characterization of an endodermally biased pluripotent substate in human embryonic stem cells. Stem Cell Reports. ISSN 2213-6711

Allison, T.F., Andrews, P.W. orcid.org/0000-0001-7215-4410, Avior, Y. et al. (37 more authors) (2018) Assessment of established techniques to determine developmental and malignant potential of human pluripotent stem cells. Nature Communications, 9. 1925. ISSN 2041-1723

Kyriakides, O., Halliwell, J.A. and Andrews, P.W. orcid.org/0000-0001-7215-4410 (2017) Acquired genetic and epigenetic variation in human pluripotent stem cells. Advances in Biochemical Engineering Biotechnology. ISSN 0724-6145

Hackland, J.O.S., Frith, T.J.R., Thompson, O. et al. (4 more authors) (2017) Top-Down Inhibition of BMP Signaling Enables Robust Induction of hPSCs Into Neural Crest in Fully Defined, Xeno-free Conditions. Stem Cell Reports, 9 (4). pp. 1043-1052. ISSN 2213-6711

Andrews, P.W. orcid.org/0000-0001-7215-4410, Ben-David, U., Benvenisty, N. et al. (8 more authors) (2017) Assessing the Safety of Human Pluripotent Stem Cells and Their Derivatives for Clinical Applications. Stem Cell Reports, 9 (1). pp. 1-4.

Baker, D., Hirst, A.J., Gokhale, P.J. orcid.org/0000-0001-7225-4403 et al. (8 more authors) (2016) Detecting Genetic Mosaicism in Cultures of Human Pluripotent Stem Cells. Stem Cell Reports, 7 (5). pp. 998-1012.

Burns, A.J., Goldstein, A.M., Newgreen, D.F. et al. (27 more authors) (2016) White paper on guidelines concerning enteric nervous system stem cell therapy for enteric neuropathies. Developmental Biology, 417 (2). pp. 229-251. ISSN 0012-1606

Damjanov, I. and Andrews, P.W. orcid.org/0000-0001-7215-4410 (2016) Teratomas produced from human pluripotent stem cells xenografted into immunodeficient mice - A histopathology atlas. International Journal of Developmental Biology, 60 (10-12). pp. 337-419. ISSN 0214-6282

Hoff, A.M., Alagaratnam, S., Zhao, S. et al. (4 more authors) (2016) Identification of Novel Fusion Genes in Testicular Germ Cell Tumors. Cancer Research, 76 (1). pp. 108-116. ISSN 0008-5472

Damjanov, I. and Andrews, P.W. orcid.org/0000-0001-7215-4410 (2016) Pluripotent human stem cells: Standing on the shoulders of giants. International Journal of Developmental Biology, 60 (10-12). pp. 321-325. ISSN 0214-6282

Jones, A.J., Gokhale, P.J. orcid.org/0000-0001-7225-4403, Allison, T.F. et al. (6 more authors) (2015) Evidence for bystander signalling between human trophoblast cells and human embryonic stem cells. Scientific Reports, 5. 11694. ISSN 2045-2322

Gokhale, P.J. orcid.org/0000-0001-7225-4403, Au-Young, J.K., Dadi, S. et al. (7 more authors) (2015) Culture Adaptation Alters Transcriptional Hierarchies among Single Human Embryonic Stem Cells Reflecting Altered Patterns of Differentiation. PLoS ONE, 10 (4). ARTN e0123467. ISSN 1932-6203

Allison, T.F., Powles-Glover, N.S., Biga, V. et al. (2 more authors) (2015) Human pluripotent stem cells as tools for high-throughput and high-content screening in drug discovery. International Journal of High Throughput Screening, 5. 1 - 13 . ISSN 1179-1381

Na, J., Baker, D., Zhang, J. et al. (2 more authors) (2014) Aneuploidy in pluripotent stem cells and implications for cancerous transformation. Protein and Cell, 5 (8). pp. 569-579. ISSN 1674-800X

Barbaric, I., Biga, V., Gokhale, P.J. orcid.org/0000-0001-7225-4403 et al. (5 more authors) (2014) Time-Lapse Analysis of Human Embryonic Stem Cells Reveals Multiple Bottlenecks Restricting Colony Formation and Their Relief upon Culture Adaptation. Stem Cell Reports, 3 (1). pp. 142-155. ISSN 2213-6711

Wongtrakoongate, P., Li, J. and Andrews, P.W. orcid.org/0000-0001-7215-4410 (2014) Aza-deoxycytidine induces apoptosis or differentiation via DNMT3B and targets embryonal carcinoma cells but not their differentiated derivatives. British Journal of Cancer, 110 (8). pp. 2131-2138. ISSN 0007-0920

Avery, S., Hirst, A.J., Baker, D. et al. (9 more authors) (2013) BCL-XL Mediates the Strong Selective Advantage of a 20q11.21 Amplification Commonly Found in Human Embryonic Stem Cell Cultures. Stem Cell Reports, 1 (5). pp. 379-386. ISSN 2213-6711

Wongtrakoongate, P., Jones, M., Gokhale, P.J. orcid.org/0000-0001-7225-4403 et al. (1 more author) (2013) STELLA Facilitates Differentiation of Germ Cell and Endodermal Lineages of Human Embryonic Stem Cells. PLOS One, 8 (2). e56893. ISSN 1932-6203

Chen, W., Jongkamonwiwat, N., Abbas, L. et al. (9 more authors) (2012) Restoration of auditory evoked responses by human ES-cell-derived otic progenitors. Nature, 490 (7419). pp. 278-282. ISSN 0028-0836

Plews, J.R., Li, J.L., Jones, M. et al. (4 more authors) (2010) Activation of pluripotency genes in human fibroblast cells by a novel mRNA based approach. Plos One, 5 (12). Art no.e14397. ISSN 1932-6203

Tonge, P.D., Olariu, V., Coca, D. et al. (4 more authors) (2010) Prepatterning in the Stem Cell Compartment. PLOS ONE, 5 (5). e10901. - . ISSN 1932-6203

Hovatta, O., Jaconi, M., Tohonen, V. et al. (12 more authors) (2010) A teratocarcinoma-like human embryonic stem cell (hESC) line and four hESC lines reveal potentially oncogenic genomic changes. Plos One , 5 (4). Art no.e10263 . ISSN 1932-6203

Akopian, V., Andrews, P.W., Beil, S. et al. (19 more authors) (2010) Comparison of defined culture systems for feeder cell free propagation of human embryonic stem cells. In Vitro Cellular & Developmental Biology - Animal, 46 (3-4). pp. 247-258. ISSN 1071-2690

Barbaric, I., Gokhale, P.J., Jones, M. et al. (3 more authors) (2010) Novel regulators of stem cell fates identified by a multivariate phenotype screen of small compounds on human embryonic stem cell colonies. Stem Cell Research, 5 (2). pp. 104-119. ISSN 1873-5061

Harrison, N.J., Barnes, J., Jones, M. et al. (3 more authors) (2009) CD30 Expression Reveals that Culture Adaptation of Human Embryonic Stem Cells Can Occur Through Differing Routes. STEM CELLS, 27 (5). pp. 1057-1065. ISSN 1066-5099

Zafarana, G., Avery, S.R., Avery, K. et al. (2 more authors) (2009) Specific Knockdown of OCT4 in Human Embryonic Stem Cells by Inducible Short Hairpin RNA Interference. STEM CELLS, 27 (4). pp. 776-782. ISSN 1066-5099

Calvanese, V., Horrillo, A., Hmadcha, A. et al. (20 more authors) (2008) Cancer Genes Hypermethylated in Human Embryonic Stem Cells. PLoS ONE, 3 (9). e3294. ISSN 1932-6203

Liew, C.G., Shah, N.N., Briston, S.J. et al. (6 more authors) (2008) PAX4 Enhances Beta-Cell Differentiation of Human Embryonic Stem Cells. PLoS ONE, 3 (3). e1783. ISSN 1932-6203

Skotheim, R.I., Autio, R., Lind, G.E. et al. (5 more authors) (2006) Novel genomic aberrations in testicular germ cell tumors by array-CGH, and associated gene expression changes. Analytical Cellular Pathology, 28 (5-6). 219786. pp. 315-326. ISSN 2210-7177

Andrews, P.W. orcid.org/0000-0001-7215-4410, Gönczöl, E., Fenderson, B.A. et al. (4 more authors) (1989) Human cytomegalovirus induces stage-specific embryonic antigen 1 in differentiating human teratocarcinoma cells and fibroblasts. Journal of Experimental Medicine, 169 (4). pp. 1347-1359. ISSN 0022-1007

Proceedings Paper

Biga, V., Alves Coelho, O.M., Gokhale, P.J. et al. (4 more authors) (2017) Statistical texture-based mapping of cell differentiation under microfluidic flow. In: Bracciali , A., Caravagna, G., Gilbert, D. and Tagliaferri, R., (eds.) CIBB 2016: Computational Intelligence Methods for Bioinformatics and Biostatistics. International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, 01-03 Sep 2016, Stirling, United Kingdom. Lecture Notes in Computer Science (vol 10477). Springer International Publishing , pp. 93-106. ISBN 9783319678337